Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00613 ATGGAAGGAATAAGCAAGAAGGAGGGATACTTTTGTGACAGACCAAGCATCTTCTCTTCTGCTCCGGAGGCACCACCTAGTCCAAGTACTCCACTTCAGCATCCACATGAAAAGAAACAGGTATCTGTTGAGGAAGAAGAGGAAGAAAATAAGGAGTCAAAGCATGCTACCATATTGGATCTAAATGTTTCAGGTGATGATTCTTGTACTGCAGAAGGACTAGAACTCAACCTCATAACCTGTTTGGATGTGGGGTCATCATCCAATGCCAATTCTTCATCAGAAGCCCCTCTTGGTTCTGATGCTGCTGAGCCAAGAGTGTTCTCTTGCAACTACTGCCACAGAAAGTTCTACAGTTCACAAGCACTAGGGGGCCACCAAAATGCACACAAGAGGGAGAGGTCAATAGCAAAGAGAGGGCACAGGTTTGGATCACAGATAATGGCCTTTGGCCTTCCCTTATTGCATAATAACAACCACTTTGCAAGCATGGCTTCTCTACCCCTTTATGGTGCTAGCAACAATAGAGGAGGAGCTCTTGGAATTCAAGCACACTCTATGATCCAAAAGCCTTCTCATCATCATCATCATGTGAGTGGATTTGGAAACTCTTATGCACACCATCACAGTTGGTCAAGACCCATCATTGAACAACAACCTGGAATAGCAAAACTAGCTGTGGCTGATTTTCACAGAACAAAATCAGCATTTTCATCATCACAAACAAGTGTTGGTAGGTTTGAAATGGTTAATACCATGATGAATTCTTCAGCCAAAAAGGAGATCAGTGGATGTGTGGCTAGAGCTGAACCTCGTTTGAAGAGTAATAATCAAGAAGAAATGAAGCACCTTGATTTATCCCTCAAGCTCTAA 873 0.4307 MEGISKKEGYFCDRPSIFSSAPEAPPSPSTPLQHPHEKKQVSVEEEEEENKESKHATILDLNVSGDDSCTAEGLELNLITCLDVGSSSNANSSSEAPLGSDAAEPRVFSCNYCHRKFYSSQALGGHQNAHKRERSIAKRGHRFGSQIMAFGLPLLHNNNHFASMASLPLYGASNNRGGALGIQAHSMIQKPSHHHHHVSGFGNSYAHHHSWSRPIIEQQPGIAKLAVADFHRTKSAFSSSQTSVGRFEMVNTMMNSSAKKEISGCVARAEPRLKSNNQEEMKHLDLSLKL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00613 290 Coils Coil 283 290 - -
Phac1g00613 290 MobiDBLite consensus disorder prediction 1 54 - -
Phac1g00613 290 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Phac1g00613 290 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Phac1g00613 290 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 8 290 IPR044246 GO:0009788
Phac1g00613 290 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Phac1g00613 290 Gene3D Classic Zinc Finger 97 148 - -
Phac1g00613 290 MobiDBLite consensus disorder prediction 37 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00613 Phac-Chr1 4824596 4826191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00613 27 290 C2H2 Transcription Factor Family AT5G10970 38.376 4.64e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00613 - - gmx:100809569 390.193