Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00611 ATGACTGTGGTGGAGGATAGAATGGATGAACTCAGAGACGAGTTTCCCATAGGAATGCGTGTTCTTGCTGTCGATGATGACTCAACATGTCTCATGATTCTGGAGACTATGCTGCGAAGGTGCCAATATCATGTAACTACCACTAAAAACGCAAAAACTGCATTGAGTCTGTTGAGAGGAAACGAAAACAGGTTTGACCTGGTAATCAGCGATGTACATATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTTGTGGGACTTGAGATGGACCTACCTGTCATAATGATGTCTGTAAATGATGACCCTAAGATGGTGATGAAGGGAATTACACATGGAGCTTGTGATTATCTTCTGAAGCCTGTTAGACTTAAGGAGGTACAGAACATTTGGCAGCATGTTGTGAGAAGGAGGACGAGTGATTCGAAGGAGCGGAGCAAAAGCAGCAACCAAGACAAGGCTAATACTGATAGCAATGAAAGAGGTTCTGTAGCAACAGGAAATTCAGATCAAAATGTAAAGTCTTCAAGAAAGAGGAAGGATGAGGCTGACTATGATAACGATGAACAAGAGAATGGCCATGACAATGAGGAGTCATCATGTCATAAGAAAGCTCGAGTTGTTTGGACTGTGGACCTGCACCAAAAGTTTGTTAATGCTGTTGATCAATTAGGCTTTGACAAAGCTGTGCCTAAAAAGATTCTTGACTTGATGAATGTTGAAAAGCTTACAAGGGAGAATGTGGCCAGCCACCTTCAGAAATTTAGGCTTTATCTGAAAAGAAGGAGCTGTGCGGCGAACCGAGAAGCTAATATGGTGGCAGCCTTAGGCACTACAGATTCATCCTTTTTGACAATGGGTTCTCTGAGTGGGGTTGGACATTTGCAGTCACTAACTGGTGCTCAACATTTTCATAACAATACTTTCAGACCCTTTGGACCTTCGGGGATGGCTGGTAGATTGAACACTTCTGTTGGTGTGAATTTGCATGGATTGCCTACTTCAGAAATTCTTCATTTGGGCCATGCACATAATTTTCACAAATCTATACATGAACCACTTAAGTTCCAACAAGCCATAATTGGTGGTAATCAGAATGTTATTCAGGGAATGCCAATGTCTACAGGTCTTGATCAATTTCAACGTAAGGGTGTGAACATTGGTGTTAGACCGATTCAAAGCATTTCCCCTTTTCTTGATGTTCAACCAAATTTTTCCTTGTCAAATAAACTCCCAGATCTGATGCCAAAATCAACAGTGGGTTGCTCGGCCTCTCCAGTTTTGGACGTCTCAAACAATGCTTTGGTATTGAAAGCTGATGGTGAAAACACACAAGGGGGTGGAGTGATATTTGGTCAAACTTCCTTAGCCTCTCAGAATTCACAATTCTCAATGCCTTTGTTGGATCAGGGTAGGTGTAGTGATATTTGGTCAAATACTGTTCAGTCATCTGGGACAAATTCTTACCCTCCAAGTGAAACTTTTCAAGGGAGGAATCTGAGTGGTGCTTCATCCATTACTTCACTGTCTAACCAATCCCTTGATTCACTAAAAGATATGCATTCTCAAGGAGTTCTTTTTACAAATAGTTCTGGACAAATAAGCAATAGTGTGGTGCCATTTCAAGGGTGGGATGACAACAATGATGATAGTTCTTTCCCTTCAACTATTTTTGGTAACTCAGTAGACTCTCTGATTGATACAGATGGCCACACTTCTATTAACTCAATCTACAACAAAAACACGGACTTCAGTTTCTTTGACCCCTTACTGATGAAACCTGATGGAATTACTGGATTGAGTGAAGAAAGCACATTGAAACAACAACAGGGGTACATCATGAATCATAACAAGTCTCAAAACAATAGTGCCGCTAATAATCTTGGTTCTCTGGAAGAATTTGTTAGTTCAATGATGAAACAGAAACAAGAAGTGAAATTATTAGATGGATACTTGTGCGACAACAATTACTCGGACGGGACATCCATTTGA 1992 0.4096 MTVVEDRMDELRDEFPIGMRVLAVDDDSTCLMILETMLRRCQYHVTTTKNAKTALSLLRGNENRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMMSVNDDPKMVMKGITHGACDYLLKPVRLKEVQNIWQHVVRRRTSDSKERSKSSNQDKANTDSNERGSVATGNSDQNVKSSRKRKDEADYDNDEQENGHDNEESSCHKKARVVWTVDLHQKFVNAVDQLGFDKAVPKKILDLMNVEKLTRENVASHLQKFRLYLKRRSCAANREANMVAALGTTDSSFLTMGSLSGVGHLQSLTGAQHFHNNTFRPFGPSGMAGRLNTSVGVNLHGLPTSEILHLGHAHNFHKSIHEPLKFQQAIIGGNQNVIQGMPMSTGLDQFQRKGVNIGVRPIQSISPFLDVQPNFSLSNKLPDLMPKSTVGCSASPVLDVSNNALVLKADGENTQGGGVIFGQTSLASQNSQFSMPLLDQGRCSDIWSNTVQSSGTNSYPPSETFQGRNLSGASSITSLSNQSLDSLKDMHSQGVLFTNSSGQISNSVVPFQGWDDNNDDSSFPSTIFGNSVDSLIDTDGHTSINSIYNKNTDFSFFDPLLMKPDGITGLSEESTLKQQQGYIMNHNKSQNNSAANNLGSLEEFVSSMMKQKQEVKLLDGYLCDNNYSDGTSI* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00611 663 ProSiteProfiles Response regulatory domain profile. 20 135 IPR001789 GO:0000160
Phac1g00611 663 MobiDBLite consensus disorder prediction 152 172 - -
Phac1g00611 663 PIRSF RR_ARR_type-B 1 660 IPR017053 GO:0003677|GO:0003700|GO:0009736
Phac1g00611 663 Gene3D - 200 262 - -
Phac1g00611 663 FunFam Two-component response regulator 200 263 - -
Phac1g00611 663 Pfam Response regulator receiver domain 21 128 IPR001789 GO:0000160
Phac1g00611 663 MobiDBLite consensus disorder prediction 136 151 - -
Phac1g00611 663 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 417 IPR045279 GO:0009736
Phac1g00611 663 NCBIfam myb-like DNA-binding domain, SHAQKYF class 204 257 IPR006447 GO:0003677
Phac1g00611 663 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 260 IPR017930 -
Phac1g00611 663 MobiDBLite consensus disorder prediction 173 187 - -
Phac1g00611 663 MobiDBLite consensus disorder prediction 136 201 - -
Phac1g00611 663 SMART REC_2 19 131 IPR001789 GO:0000160
Phac1g00611 663 Gene3D - 18 157 - -
Phac1g00611 663 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
Phac1g00611 663 Pfam Myb-like DNA-binding domain 206 254 IPR001005 -
Phac1g00611 663 CDD REC_typeB_ARR-like 21 135 - -
Phac1g00611 663 SUPERFAMILY CheY-like 18 143 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00611 Phac-Chr1 4783582 4788361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00611 3 650 Response Regulator Gene Family AT2G25180 41.353 3.10e-129 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Phac1g00611 Response_reg 7e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00611 - K14491 var:108336977 1022.31