Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac1g00607 | ATGAGTAGCTCAATTAAGCTTCGTGAAAGATCCGAATGTAGACCCCGTTATAGCTTTGATGTGTCAGATGAGGAGGATGAAGTTATATCCCCTAGAAAACTTGGGAAATCTACAGAAAATGATGTTGAAATTGATGGAAATGATACTAATGTTGAAGGGCTTCGTGGAAGATCGAGTCAAAGGAAGAAAAAATATACTATTGATGATTCTGATGACGACGATTCAGTTATTCTCCCTAGGAAACGTGGGAGACCTAAAAAAATAAATAAGAAAATTGATACAAGTGATACTAATGAGAGTGGCTTGGTTGAACGGCTTCGTGAAAGATCCTGTAAAAAGAAGCCAAATTATATTCTTTATGAGTCAGATGAAGATGAGGATATTTTACTTAGCAAAAACCTTGAAGAAACCATTGGGAAAATTGAAAGAAGTGACACTAAAGAGAATTCATGTCAAGCTTGCGGAGAAAAAGGAGATCTTCTGGGCTGTGAAACATGCAGCTACTCCTTCCATCCAAGTTGTGTAATCTCACCAGTTAGAATTCTCATTCGAGACAATTGGAGGTGCCCTTTTTGTGCTAGCCCAATGAGTGGTATTGATAAGATATTAGATTGTGAGATGCGTTCTGTGGTAGCAGCTGGTGAAAGTGATGCAACAAAGTTGGAGTCAAAGCAGACTCTTGTCAAGCAATATCTTGTTAAGTGGAAGGGACTCTCATATTTGCACTGCACATGGGTTCCTGAGGAAGAGTTTTTGAAGGCTTACAAGACTAAGCCAGGTCTAAAGATCAAAGTAAACAGCTTCCATCGTCGTATGGCATCAGCCAAGAATCCTACAGAAGATTTTGTTCCCATTAGATCTGAATGGACTACGGTTGATCGAATAATTGCTTGCAGTGGTAGCGATGACCAGAAGGAATATCTTGTGAAGTGGAAAGAGCTTCCATATGATGAGTGCTATTGGGAGCTGGAGTCAGATATCTCTGCATTTCAAACAGAAATAGAAAGATTCAACACATTTCAGTCTAGATCAAGGAAAGTTTCATCTAGTAAGAAAAGTAGTATTCAGGATGGTTCTGGATCGAATAATCTGCAGAAAGAATTTTTGCAGTACGAAAATAGCCCACAATTTCTCTCAGGGGGTTCACTGCATCCATATCAGCTTGAAGGATTGAACTTCTTACGATTTTCATGGTCCAAGCAAACTCATGTTATACTTGCTGATGAAATGGGGCTTGGAAAAACCATTCAAAGTATTGCTTTCTTAGCATCTCTTTTTGAAGAGAATGTTTCTCCACATCTGGTGGTTGCTCCACTTTCGACATTAAGAAACTGGGAACGTGAATTTGCAACTTGGGCACCTCACATGAATGTGGTTATGTATTTTGGATCTGCTAATGCTCGTGCTATAATCAGAGAGTATGAGTTTTACTTTCCGAAGAATCAAAAGGGGAAAAAGAAAAACAAATCTAAAAAAAGTGTTTATGACAGCAAACAAGGAAGGATAAAGTTTGATGTCCTTTTGACTTCATATGAGATGATAAATTCTGATTCATCTTCATTGAAACCTATAAAGTGGGAGAGCATGATAGTTGATGAGGGTCACCGTCTCAAAAACAAAAATTCTAGATTGTTTTCTTCATTGAAACAATATTCCACCAAACATCGTGTGCTTTTGACTGGAACTCCTCTTCAGAATAATTTGGATGAACTTTTTATGCTGATGCACTTCCTTGATGCTGGAAAGTTTGGAAGTTTAGAGGAGTTCCAGGAAGAGTTTAAGGATATCAACAGAGAGGAGCAGATTTTGAGACTGCATAAAATGTTGGCACCACATCTCTTGAGAAGAATGAAGAAAGATGTGTTGACGGAGCTACCTCCGAAGAAGGAACTTATTTTACGTGTTGAATTAAGCAGTCTACAGAAAGAATACTATAAGGCAATTTTGACACGTAATTATGAGATATTAACCCGCCAAGGTGGTGCACAAATTTCTCTTATCAATGTTGTTATGGAACTGCGTAAGCTGTGCTGCCATCCCTTCATGTTACAAGGAGTTCAACCTGATCTTAATGATGAAAAACAAGCATATGAGCAATTACTTGAATCATCTGGGAAGCTGCAATTGTTAGACAAGCTGATGGTGAAACTTAAAGAGCAAGGTCATAGAGTCCTTATATATTCCCAATTTCAGAGAATGCTTGACTTACTTGAAGATTACTGTTCTTTCAAGCAATGGCAATATGAGAGGATAGATGGCAAGGTTGGAGGTGCTGAAAGACAAGTAAAGATAGATTGGTTTAATGCTGAAGATTCTTCAAGATTTTGTTTCCTTCTATCTACTAGAGCTGGGGGTTTGGGGATAAACCTTACTACAGCTGACACAGTTATTCTATACGACAGTGACTGGAATCCCCACGCTGATTTACAAGCCATGGCCAGGGCGCATCGCCTAGGACAAACGAGGAAGGTCATGGTGTATAGGCTTATAACCAGAGGAACAATTGAAGAGAAGATGATTCAGATGACCAAGAAAAAAATGGTCTTAGAACATCTGGTTGTAGGCAGGCTACAGTCTGAAAACATCAAACAGGAGGAGCTAGATGATATTGTAAGATACGGCTCAGAAGAGTTATTTGCTGATGAAAATGATGAAGCAGGCAAATCTCGCCAAATTCATTACGATGCTGATGCAATCGATAGGTTGCTGAATCGTGATGAAGTTGGTAATGAAGAGGTGCCTGCTTTGGATGGTGAAGATGAAGATGGATTTCTGAAGGCCTTCAAGGTAGCAAATTTTGAATACATCGAGGAGGCTGAGGCAGCAGAGGAGGTGGCAGAAAATGTAGCAACTGAGAATCAATCCTCTGCTGCCAGTTTGAAAAAAGCAAATCACTGGGAAGAGCTGTTGAAAGAAAGATATGAACAACAGAGAGCTGAAGAGTTAAATGCCTTAGGCAAAGGGAAGCGAACCTGCACCATGTGGCAGGGAGAAGGCTCTACTCGTTGGGGAGATCTAAGCTCCGATGGTGAAGATGTTAAAGATGACAACTATGAAGTGGATCTTAGTGAGGATGATTCAACTTCATTTGATACTACCAGAAGTCCTCACAAAACCAAAGTTCGCGCAGAGAGCCCAGAGCCACTTCCATTAATGGAAGGGCAAGGAAGATCGCTGAAAGTACTTGGTTTTAGTCAAAATCAAAGGGCTGATTTTCTTCAAATTTTGATGAGATTTGGAGTGGGTGATTTTGACTGGTCAGAGTTTACTGCCCGCATGAAACAGAAGAGTTTTGAAGAAATCCACGAGTATGGACAACTCTTTTTGTCTCATATTGCGGAAGAAATTACTGATTCCCCTACATTCACAGATGGAGTTCCAAAAGAAGGACTTCAAATACCAGATGTGCTTGTAAGGATTGCAGCTCTGATCTTGATAAGAGACAAAGTGAAGTTTATATCAGAAAATCCTGGAACTTCACTTTTTTCAGATGATATCTTATCACGCTATCCAGGTCTGAAGGGTACAAAGATCTGGAAGGAGGAGCATGATGTAGTGCTACTGCATGCCATGTTGAAGCATGGTTATGCAAGGTGGCATGATATTGCTGAAGATAAGGATCTGAATCTTCAGAAGGTTATATGTCAGGAGTTAAATATTCCAGTTGTAGATGTACCAGTTCAACTACAGTCTGATATGACAAATGTGCAGTCTAGCTGCAGCCCATCTGGTGAGTATGTTAGGACTGACATTGCAACTGACGGTGCAAATATGACAAACGTGCAATCGAGCTTCATCAAATCTAAGAGTGGTGCGCGTGGTTCTAGTCATCGTCGGGAGCAAGTCCAAGCATTCCGTAAGTCCGAGGTGTGGCATGAGTATAGACAAATGCAGAAAGCACAGACTGAGTTTATAAAGAAAAGGTTTCGTCTCTTGGAAAAAGGTCTCAACGCTGAGTGCCAGAAAGAGTACTATAGTGATTCGAAACCAAATGAACTGGATACTAAAGAACTTGAAGGTAATGGCACACGTGTAGCTGTCCCAGAGTATATCGTATCTGAGACAGACGAAAGTGTGGATGATCCTCTGCCTCAAGTCAAAAGAATAGACACAGAGGATATTTATACTTCTGCATGTGACTTTGAACAAGATCGCCTGCAATTAGTATCTCTCTACAATGAGATTTGCTCAACTGTGGAGGAAAGCGCCATTGGTTTAGTCGAAACGGCAACAGAACAGGCACAAGAGCACGCTATTGAGAACTTGGGTCTAATCCAAAGCATTTCTGCAGATGTCATTGCAATTCTAAAGGGTAAAGACACTGCAGATTAA | 4332 | 0.4026 | MSSSIKLRERSECRPRYSFDVSDEEDEVISPRKLGKSTENDVEIDGNDTNVEGLRGRSSQRKKKYTIDDSDDDDSVILPRKRGRPKKINKKIDTSDTNESGLVERLRERSCKKKPNYILYESDEDEDILLSKNLEETIGKIERSDTKENSCQACGEKGDLLGCETCSYSFHPSCVISPVRILIRDNWRCPFCASPMSGIDKILDCEMRSVVAAGESDATKLESKQTLVKQYLVKWKGLSYLHCTWVPEEEFLKAYKTKPGLKIKVNSFHRRMASAKNPTEDFVPIRSEWTTVDRIIACSGSDDQKEYLVKWKELPYDECYWELESDISAFQTEIERFNTFQSRSRKVSSSKKSSIQDGSGSNNLQKEFLQYENSPQFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLFEENVSPHLVVAPLSTLRNWEREFATWAPHMNVVMYFGSANARAIIREYEFYFPKNQKGKKKNKSKKSVYDSKQGRIKFDVLLTSYEMINSDSSSLKPIKWESMIVDEGHRLKNKNSRLFSSLKQYSTKHRVLLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINREEQILRLHKMLAPHLLRRMKKDVLTELPPKKELILRVELSSLQKEYYKAILTRNYEILTRQGGAQISLINVVMELRKLCCHPFMLQGVQPDLNDEKQAYEQLLESSGKLQLLDKLMVKLKEQGHRVLIYSQFQRMLDLLEDYCSFKQWQYERIDGKVGGAERQVKIDWFNAEDSSRFCFLLSTRAGGLGINLTTADTVILYDSDWNPHADLQAMARAHRLGQTRKVMVYRLITRGTIEEKMIQMTKKKMVLEHLVVGRLQSENIKQEELDDIVRYGSEELFADENDEAGKSRQIHYDADAIDRLLNRDEVGNEEVPALDGEDEDGFLKAFKVANFEYIEEAEAAEEVAENVATENQSSAASLKKANHWEELLKERYEQQRAEELNALGKGKRTCTMWQGEGSTRWGDLSSDGEDVKDDNYEVDLSEDDSTSFDTTRSPHKTKVRAESPEPLPLMEGQGRSLKVLGFSQNQRADFLQILMRFGVGDFDWSEFTARMKQKSFEEIHEYGQLFLSHIAEEITDSPTFTDGVPKEGLQIPDVLVRIAALILIRDKVKFISENPGTSLFSDDILSRYPGLKGTKIWKEEHDVVLLHAMLKHGYARWHDIAEDKDLNLQKVICQELNIPVVDVPVQLQSDMTNVQSSCSPSGEYVRTDIATDGANMTNVQSSFIKSKSGARGSSHRREQVQAFRKSEVWHEYRQMQKAQTEFIKKRFRLLEKGLNAECQKEYYSDSKPNELDTKELEGNGTRVAVPEYIVSETDESVDDPLPQVKRIDTEDIYTSACDFEQDRLQLVSLYNEICSTVEESAIGLVETATEQAQEHAIENLGLIQSISADVIAILKGKDTAD* | 1444 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac1g00607 | 1443 | Pfam | Helicase conserved C-terminal domain | 706 | 819 | IPR001650 | - | |
| Phac1g00607 | 1443 | Gene3D | - | 375 | 625 | IPR038718 | - | |
| Phac1g00607 | 1443 | MobiDBLite | consensus disorder prediction | 1027 | 1044 | - | - | |
| Phac1g00607 | 1443 | SUPERFAMILY | Chromo domain-like | 163 | 276 | IPR016197 | - | |
| Phac1g00607 | 1443 | SMART | DUF1087_2 | 940 | 1015 | IPR009463 | - | |
| Phac1g00607 | 1443 | SMART | chromo_7 | 197 | 260 | IPR000953 | - | |
| Phac1g00607 | 1443 | SMART | chromo_7 | 288 | 342 | IPR000953 | - | |
| Phac1g00607 | 1443 | Gene3D | - | 281 | 339 | - | - | |
| Phac1g00607 | 1443 | PANTHER | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED | 21 | 1339 | - | - | |
| Phac1g00607 | 1443 | MobiDBLite | consensus disorder prediction | 55 | 81 | - | - |
Showing 1 to 10 of 40 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac1g00607 | K11643 | - | gmx:100804203 | 1790.39 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phac1g00607 | 1 | 4735398 | 4749685 | Phac1g00607 | 1 | 4735398 | 4749685 | ECH |
Showing 1 to 1 of 1 entries