LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac1g00596	ATGTTAGGCATTTCTCAGTTTCTTCTCTTCATCTTCTTCACCACCTTCTCTCTCTTCTCTCCAATTCATTCCCTCTTCTTCAACATCACCAACTTTGATGATCCAACATCAGACATATCCTACCAGGGTGATGGAAGATCAACCAACGGCTCCATCGATCTCAACAAAGTTAGCTACTACTTTCGTGTCGGAAGGGCTCTCTACTCCAAACCCCTCCGCCTGTGGGACCCATCTTCCAATGTTGTCACCGACTTTGTCACGCGCTTCACCTTCTCCATTGACAGAGTAAACAGCTCTGAGACCTCTTATGCCGATGGCTTTGCCTTTTACCTGGCCCCTCTTGGCTACCAGATCCCACCAAATTCCGCAGGTGGCACCTTTGCCCTCTTCAACGCCACAACCAACAGTGACCTCCCTCAGAACCATGTTTTTGCTGTGGAGTTTGACACCTTTATTGGCTCCACTGATCCCCCAATGAAACATGTTGGTGTAAACGACAACTCTTTAACCTCTGTGGCCTTTGCCAACTTTGACATCGACAACAACCTCGGAAAAATGTGTCACACTTTGATCACCTACACCGCCTCCACTCAAACCCTCTTTGTTTCTTGGTCCTTCAAAGGAAGACCAACCACAAAGGACAACGACAATAATTCTTCTCTGTCTTACAGTATCGACCTCAAGAAAATTCTCCCAGAGTGGGTCAATATTGGTTTCTCCGCCTCAACTGGACTTTACACTGAACACAATGTTATTTATTCGTGGGAGTTCAATTCCTCTTTGAAAGATTCCTCCGCAGAAAATGAGGGTGTGAAGCTAAAACACAAAGGGTCAAAGCTTGTGTTAATCGTTGCCATTCTTTGTCCACTGGTTCTTCTGTTTCTGGGGGCGAGTATTTTTGTGGTCATGTTGATAAAGAGAAAGAGAAGAAAGGATGATTGTATGTTATATGATGCTGGCGACGACGAGATTGGTCCAACTTCAGTTAAATTTGACTTGGATAAAGGAACTATCCCGAGAAGATTCGAGTACAAAGAGCTGGTGGATGCCACCAACGGTTTTTCAGATGAAAGAAGGCTCGGACAAGGAGCTTCGGGGCAGGTATACAAGGGTGTGTTGAGTTACCTAGGAAGAGTTGTGGCCATCAAGAGAATCTTTGCAGACTTCGAGAATTCAGAGAGAGTTTTCACCAACGAGGTTAGAATAATAAGCCGTTTAATCCACAAAAACTTGGTCCAGTTCATAGGGTGGTGTCACGAAGAAGGTGAGTTCCTCTTGATTTTCGAATACATGCAAAACGGAAGCCTCGACACTCATTTGTTTGGAAACAAGAGGATGTTAGAGTGGCATGTGAGGTACAAGATCGCACTTGGCGTTGTAACTGCGCTTCATTATCTTCACGAGGACGCAGAGCAGTGTGTGCTACACAGGGACATAAAATCTGCGAATGTGTTGTTGGACATGGAGTTTAACACCAAGGTGGGGGATTTTGGCATGGCCAAATTGGTGGATCCAAGGTTGAGAACTCAACGAACTGGGGTGGTTGGAACATACGGTTACTTAGCACCTGAATACGTGAACGGAGGAAGAGCCAGCAGGGAATCAGATATGTACAGTTTTGGAGTGGTGGCATTGGAGATAGCAAGTGGGAGGAGGACTTACGAAGACGGGGAGTTTCATGTTTGTTTGATGAATTGGGTGTGGCAGCTTTATGTGGAAGGGGAAATTCTGAGGGCTGCAGATGAGAAATTGAGGAATGAGTTTGATGAGAATGAGATGAGGAGTTTGCTTGTGGTGGGGTTATGGTGCACAAACCCTAATGATAAAGAGAGGCCTAAGGCTGCACAAGTGATGAAGGTTTTGCAGCTTGAAGCACCATTGCCACTGCTTCCACTTGATATGTATGAACGTGCTCCTCCCATGCAACTCATTACAATGCCCCATCATCACAGTAATCCTCATTCAGGGCCATCACAACCCATTACTAACAGTTTTGTGAGTGTTGGAAGGTGA	2013	0.456	MLGISQFLLFIFFTTFSLFSPIHSLFFNITNFDDPTSDISYQGDGRSTNGSIDLNKVSYYFRVGRALYSKPLRLWDPSSNVVTDFVTRFTFSIDRVNSSETSYADGFAFYLAPLGYQIPPNSAGGTFALFNATTNSDLPQNHVFAVEFDTFIGSTDPPMKHVGVNDNSLTSVAFANFDIDNNLGKMCHTLITYTASTQTLFVSWSFKGRPTTKDNDNNSSLSYSIDLKKILPEWVNIGFSASTGLYTEHNVIYSWEFNSSLKDSSAENEGVKLKHKGSKLVLIVAILCPLVLLFLGASIFVVMLIKRKRRKDDCMLYDAGDDEIGPTSVKFDLDKGTIPRRFEYKELVDATNGFSDERRLGQGASGQVYKGVLSYLGRVVAIKRIFADFENSERVFTNEVRIISRLIHKNLVQFIGWCHEEGEFLLIFEYMQNGSLDTHLFGNKRMLEWHVRYKIALGVVTALHYLHEDAEQCVLHRDIKSANVLLDMEFNTKVGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYVNGGRASRESDMYSFGVVALEIASGRRTYEDGEFHVCLMNWVWQLYVEGEILRAADEKLRNEFDENEMRSLLVVGLWCTNPNDKERPKAAQVMKVLQLEAPLPLLPLDMYERAPPMQLITMPHHHSNPHSGPSQPITNSFVSVGR*	671

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac1g00596	670	Pfam	Protein kinase domain	355	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac1g00596	670	Pfam	Legume lectin domain	26	268	IPR001220	GO:0030246
	Phac1g00596	670	SUPERFAMILY	Concanavalin A-like lectins/glucanases	23	261	IPR013320	-
	Phac1g00596	670	FunFam	L-type lectin-domain containing receptor kinase IX.1	431	631	-	-
	Phac1g00596	670	Gene3D	-	23	274	-	-
	Phac1g00596	670	CDD	lectin_legume_LecRK_Arcelin_ConA	27	261	IPR001220	GO:0030246
	Phac1g00596	670	ProSitePatterns	Legume lectins alpha-chain signature.	231	240	IPR000985	-
	Phac1g00596	670	MobiDBLite	consensus disorder prediction	647	670	-	-
	Phac1g00596	670	MobiDBLite	consensus disorder prediction	648	670	-	-
	Phac1g00596	670	ProSiteProfiles	Protein kinase domain profile.	354	630	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac1g00596	670	PANTHER	-	48	625	-	-
	Phac1g00596	670	Gene3D	Transferase(Phosphotransferase) domain 1	431	625	-	-
	Phac1g00596	670	Gene3D	Phosphorylase Kinase; domain 1	339	430	-	-
	Phac1g00596	670	ProSitePatterns	Protein kinases ATP-binding region signature.	360	383	IPR017441	GO:0005524
	Phac1g00596	670	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	474	486	IPR008271	GO:0004672\|GO:0006468
	Phac1g00596	670	SUPERFAMILY	Protein kinase-like (PK-like)	338	643	IPR011009	-
	Phac1g00596	670	SMART	serkin_6	354	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Phac1g00596	670	FunFam	L-type lectin-domain containing receptor kinase IX.1	339	430	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac1g00596	Phac-Chr1	4628981	4631596	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac1g00596	11	634	Receptor kinase-like Gene Family	AT5G10530	45.814	0.0	541

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Phac1g00596		Pkinase	2.8e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac1g00596	-		-	vun:114193012	1220.3