Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00595 ATGGAGATGTCATTTGTGGTTGCAGTGCCATTAAGAGTAGGTAATTGTTGTTCAGTCTGTGATAACCCAACCATAGTTCCCCCCATGGATGTATCTAGGTTTAAGCTGATGGCGGATACAGGGTTGTTATCTAATTCTGTAACTAAGGTTTCCACCAAGACAGTTGCAGGTTCCGATGATTGTGATGAGAGTGGCAATTTGGAGGATGAAGCTGGTATTACTGAGGTTATACCACCAAAACAGGATAGAGAAGGAGAGAATCCTATGTTAGATATGATATCCCAAAATGGAAGCACTTTGGTTGCTGGTGATGAAGTGTTAGCCGATGAAATTGAGGAGGATTCTTTGTCATTGGAAGGTGACCAGGTTGTTGATAGCTCATGTTCTCTTTCTGCAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCCTTCTGTTTTGATGCTATTTCTGATGTCGGGACACCATGTTCTGCTTATGTAGATAAGAGCATTGGTGCTGTCAATATTGTTGCCGAGGCAGTTGATTTGGGGGAATCAAATGTTGACACAGATATTACGACTGAACCTCTTGCTGCGGCAGTGAGCCTTGAAGAAGAGAATGAAATTAGAACTGGCCCTAATCCTTCTGACGTTGTTCTTCATCAGTTGCCCCAGGAAAAGGGGGTGAGTGGAATAGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATATCTGTGTGTGGAAGAAGACCTGAGATGGAAGATTCACTTGCAACTGTGCCTCGATTTTTGAAAATTCCTATTCAGATGCTAATTGGTGATCGGGTGCTTGATGGAATAAACAAGTGTTTTAATCAGCAGATGACTCATTTCTTTGGAGTCTATGATGGGCATGGTGGCTCTCAGGTTGCAAAGTATTGTCAAGATCGTATCCACAAGGCTTTGGCTGAGGAAATAGATTTTTTCAAGGAAACTCTAATCAGTGGAAGTATGAAGGATGGTTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCCTAAAGGTTGATGCTGAAGTTGGAGGGAAAGTTGATAATGAACCTGTTGCCCCAGAAACTGTCGGCTCCACTGCTGTTGTTGCTGTTATTTCTTCATCTCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCTGTTCTATGTCGCGGCAAAGAACCCATGGCATTATCAGAGGACCATAAACCTAACCGAACGGATGAACATGCAAGAATTGAGGCAGCTGGAGGAAAAGTGATTCAATGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATCGGTATGCACTTTTTAATCAATTACTTTACTTTCAGTATCTCTTGTGGGGACTAG 1380 0.4217 MEMSFVVAVPLRVGNCCSVCDNPTIVPPMDVSRFKLMADTGLLSNSVTKVSTKTVAGSDDCDESGNLEDEAGITEVIPPKQDREGENPMLDMISQNGSTLVAGDEVLADEIEEDSLSLEGDQVVDSSCSLSAVSENSSVCGEESFCFDAISDVGTPCSAYVDKSIGAVNIVAEAVDLGESNVDTDITTEPLAAAVSLEEENEIRTGPNPSDVVLHQLPQEKGVSGIVGRSVFELDYTPLYGFISVCGRRPEMEDSLATVPRFLKIPIQMLIGDRVLDGINKCFNQQMTHFFGVYDGHGGSQVAKYCQDRIHKALAEEIDFFKETLISGSMKDGCQDQWKKAFTNCFLKVDAEVGGKVDNEPVAPETVGSTAVVAVISSSHIIVANCGDSRAVLCRGKEPMALSEDHKPNRTDEHARIEAAGGKVIQWNGHRVFGVLAMSRSIGMHFLINYFTFSISCGD* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00595 459 SMART PP2C_4 227 458 IPR001932 -
Phac1g00595 459 FunFam Protein phosphatase 2C 50 237 455 - -
Phac1g00595 459 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Phac1g00595 459 PANTHER PROTEIN PHOSPHATASE 192 451 IPR015655 GO:0004722|GO:0006470
Phac1g00595 459 SUPERFAMILY PP2C-like 232 448 IPR036457 -
Phac1g00595 459 Gene3D - 226 456 IPR036457 -
Phac1g00595 459 Pfam Protein phosphatase 2C 277 450 IPR001932 -
Phac1g00595 459 CDD PP2Cc 240 447 IPR001932 -
Phac1g00595 459 ProSiteProfiles PPM-type phosphatase domain profile. 239 459 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00595 Phac-Chr1 4618701 4623624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00595 122 445 PP2C-type Phosphatase Gene Family AT1G72770 50.599 4.02e-100 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00595 K14497 - gmx:100805281 751.51