Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00593 ATGGAGATGTCATTTGTGGTTGCAGTGCCATTAAGAGTAGGTAATTGTTGTTCAGTCTGTGATAACCCAACCATAGTTCCCCCCATGGATGTATCTAGGTTTAAGCTGATGGCGGATACAGGGTTGTTATCTAATTCTGTAACTAAGGTTTCCACCAAGACAGTTGCAGGTTCCGATGATTGTGATGAGAGTGGCAATTTGGAGGATGAAGCTGGTATTACTGAGGTTATACCACCAAAACAGGATAGAGAAGGAGAGAATCCTATGTTAGATATGATATCCCAAAATGGAAGCACTTTGGTTGCTGGTGATGAAGTGTTAGCCGATGAAATTGAGGAGGATTCTTTGTCATTGGAAGGTGACCAGGTTGTTGATAGCTCATGTTCTCTTTCTGCAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCCTTCTGTTTTGATGCTATTTCTGATGTCGGGACACCATGTTCTGCTTATGTAGATAAGAGCATTGGTGCTGTCAATATTGTTGCCGAGGCAGTTGATTTGGGGGAATCAAATGTTGACACAGATATTACGACTGAACCTCTTGCTGCGGCAGTGAGCCTTGAAGAAGAGAATGAAATTAGAACTGGCCCTAATCCTTCTGACGTTGTTCTTCATCAGTTGCCCCAGGAAAAGGGGGTGAGTGGAATAGTTGGTCGGAGTGTTTTTGAATTGGATTATACCCCACTTTATGGATTCATATCTGTGTGTGGAAGAAGACCTGAGATGGAAGATTCACTTGCAACTGTGCCTCGATTTTTGAAAATTCCTATTCAGATGCTAATTGGTGATCGGGTGCTTGATGGAATAAACAAGTGTTTTAATCAGCAGATGACTCATTTCTTTGGAGTCTATGATGGGCATGGTGGCTCTCAGGTTGCAAAGTATTGTCAAGATCGTATCCACAAGGCTTTGGCTGAGGAAATAGATTTTTTCAAGGAAACTCTAATCAGTGGAAGTATGAAGGATGGTTGTCAAGATCAGTGGAAAAAAGCTTTCACCAATTGTTTCCTAAAGGTTGATGCTGAAGTTGGAGGGAAAGTTGATAATGAACCTGTTGCCCCAGAAACTGTCGGCTCCACTGCTGTTGTTGCTGTTATTTCTTCATCTCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCTGTTCTATGTCGCGGCAAAGAACCCATGGCATTATCAGAGGACCATAAACCTAACCGAACGGATGAACATGCAAGAATTGAGGCAGCTGGAGGAAAAGTGATTCAATGGAATGGTCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATCGGCAAAATATTTTGTTATACGAGGCCAAAGGCTGGTAGAGGCAATTTTTGA 1377 0.4234 MEMSFVVAVPLRVGNCCSVCDNPTIVPPMDVSRFKLMADTGLLSNSVTKVSTKTVAGSDDCDESGNLEDEAGITEVIPPKQDREGENPMLDMISQNGSTLVAGDEVLADEIEEDSLSLEGDQVVDSSCSLSAVSENSSVCGEESFCFDAISDVGTPCSAYVDKSIGAVNIVAEAVDLGESNVDTDITTEPLAAAVSLEEENEIRTGPNPSDVVLHQLPQEKGVSGIVGRSVFELDYTPLYGFISVCGRRPEMEDSLATVPRFLKIPIQMLIGDRVLDGINKCFNQQMTHFFGVYDGHGGSQVAKYCQDRIHKALAEEIDFFKETLISGSMKDGCQDQWKKAFTNCFLKVDAEVGGKVDNEPVAPETVGSTAVVAVISSSHIIVANCGDSRAVLCRGKEPMALSEDHKPNRTDEHARIEAAGGKVIQWNGHRVFGVLAMSRSIGKIFCYTRPKAGRGNF* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00593 458 SMART PP2C_4 227 449 IPR001932 -
Phac1g00593 458 SUPERFAMILY PP2C-like 232 448 IPR036457 -
Phac1g00593 458 CDD PP2Cc 240 443 IPR001932 -
Phac1g00593 458 PANTHER PROTEIN PHOSPHATASE 192 445 IPR015655 GO:0004722|GO:0006470
Phac1g00593 458 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169
Phac1g00593 458 ProSiteProfiles PPM-type phosphatase domain profile. 239 458 IPR001932 -
Phac1g00593 458 Gene3D - 226 449 IPR036457 -
Phac1g00593 458 FunFam Protein phosphatase 2C 50 237 453 - -
Phac1g00593 458 Pfam Protein phosphatase 2C 277 448 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00593 Phac-Chr1 4618701 4623624 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00593 122 448 PP2C-type Phosphatase Gene Family AT1G72770 50.445 6.33e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00593 K14497 - gmx:100805281 749.969