Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00589 ATGTCGACGGTTTACGTTCTAGAACCTCCGACGAAGGGGAAAGTGGTACTGAGCACCACGCGCGGGCCTTTGGACATCGAGCTATGGCCGAAGGAGGCTCCGAAAGCCGTGAGGAACTTCGTGCAGCTCTGCCTCGAAAACTATTATGACAACACCATCTTCCACCGCGTCATCAAGGACTTCCTCGTCCAAGCTGGCGATCCCACCGCCTCCGGCACCGGAGGTGAAAGCATTTATGGTGGTGTTTTTGCGGATGAGTTTCATTCTCGTTTAAAATTCAAGCACAGAGGAATAGTTGCGATGGCAAGTTCTGGATCTCCAAATTCCAATGGAAGTCAGTTTTTCATCACTCTCGACCGTTGTGACTGGCTTGATCGCAAGCATACAATTTTTGGAAAAGTGACAGGAGATACTATGTATAATCTTTTGAGACTGGGTGAAGTTGAAACTGATAAGAATGACCGGCCTTTAGATCCGCCAAAGATTTTATCAGTTGAGGTGTTATGGAATCCATTTGAAGATATTGTTCCAAGAACACTTCAGAAATCACAAACTGAAGCTAGAGTTGATGCTGAAAGTAAAGAGCAGAAGAAGAAAGGTGTAAAAAAATTGAACTTGCTTTCATTTGGGGAAGAAGCTGAAGAAGATGAAAAGGAATTGGCATCGGTGAAGCAAAAGATTAAGAGCAGTCACGATGTCTTGAACGATCCTCGACTTCTAAAGGAAGAAACACCTGATGGTGAACTGAGTTCGTCAAGAAGAGATCTGCAGTTGTCTGTTAGGGAGACACTTAACTCAAAGAAAGAAGAGCCTCAGAAAGATTCAGCACCTGGTAACATTGCTCGTCTTGATTCCAGTGATGATGATGAAGCAGATTTTGATTCAAGAATGCGCATGCAGATACTCAAAAAGCGGAAGGAGTTGGGTGATCTCCCTCCAAAGCCCAAGTTGCAAAAAGGAGGAGGAAGGTCGATTCCAGAGAATCATGATACATCAGCACCAAGGTCCAATGCTGTCAGTGCTGATGAGGATCAACAAAAGGTGGAAAAGTTGTCCATGAAGAAAAAGGGCGTAGGATCTGAAGCAAGAGCTGAACGAATGGCTAATGCAGATGCAGATCTGCAACTATTAAATGAAACTGAGAGAGGAAGACAATTGCAGAAGCAGAAGAAGCGCCGACTTCAGGGGCGCGAAGATGAAGTTCTGGCTAAACTTCAAAAATTTAAGAATTCTTTAGCAGCAAAGGAGACACCCCCTGCTGGCAAATCTGGAGATGTTAATAGTGAGTTGTCTGACTGGAAAGCTGTCAGTTTAAAATTTGACCCCGAGTCTGGCAAGGACCGCATGTCACGCAATGAGGACCCAAATGACTATGTTGTGCACGACCCACTTCTGGAAAAGGGGAAAGAGAAGTTTAATAGGATGATGGCCAAACAAAAGAGACGAGAACGAGAGTGGGCTGGGAGATCTCTTACTTGA 1479 0.449 MSTVYVLEPPTKGKVVLSTTRGPLDIELWPKEAPKAVRNFVQLCLENYYDNTIFHRVIKDFLVQAGDPTASGTGGESIYGGVFADEFHSRLKFKHRGIVAMASSGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPKILSVEVLWNPFEDIVPRTLQKSQTEARVDAESKEQKKKGVKKLNLLSFGEEAEEDEKELASVKQKIKSSHDVLNDPRLLKEETPDGELSSSRRDLQLSVRETLNSKKEEPQKDSAPGNIARLDSSDDDEADFDSRMRMQILKKRKELGDLPPKPKLQKGGGRSIPENHDTSAPRSNAVSADEDQQKVEKLSMKKKGVGSEARAERMANADADLQLLNETERGRQLQKQKKRRLQGREDEVLAKLQKFKNSLAAKETPPAGKSGDVNSELSDWKAVSLKFDPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNRMMAKQKRREREWAGRSLT* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00589 492 MobiDBLite consensus disorder prediction 439 492 - -
Phac1g00589 492 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 49 66 IPR020892 GO:0003755|GO:0006457
Phac1g00589 492 MobiDBLite consensus disorder prediction 260 275 - -
Phac1g00589 492 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Phac1g00589 492 SUPERFAMILY Cyclophilin-like 14 184 IPR029000 -
Phac1g00589 492 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Phac1g00589 492 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Phac1g00589 492 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Phac1g00589 492 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Phac1g00589 492 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Phac1g00589 492 MobiDBLite consensus disorder prediction 225 492 - -
Phac1g00589 492 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Phac1g00589 492 CDD cyclophilin_CeCYP16-like 8 179 - -
Phac1g00589 492 MobiDBLite consensus disorder prediction 283 313 - -
Phac1g00589 492 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 11 217 IPR044666 -
Phac1g00589 492 Gene3D - 2 182 IPR029000 -
Phac1g00589 492 MobiDBLite consensus disorder prediction 342 368 - -
Phac1g00589 492 MobiDBLite consensus disorder prediction 225 250 - -
Phac1g00589 492 FunFam Peptidyl-prolyl cis-trans isomerase CWC27 homolog 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00589 Phac-Chr1 4591388 4600757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00589 9 172 U-box Gene Family AT5G67530 46.341 1.36e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00589 K12737 - gmx:100793148 822.387