Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00588 ATGGCAAGTTCTGGATCTCCAAATTCCAATGGAAGTCAGTTTTTCATCACTCTCGACCGTTGTGACTGGCTTGATCGCAAGCATACAATTTTTGGAAAAGTGACAGGAGATACTATGTATAATCTTTTGAGACTGGGTGAAGTTGAAACTGATAAGAATGACCGGCCTTTAGATCCGCCAAAGATTTTATCAGTTGAGGTGTTATGGAATCCATTTGAAGATATTGTTCCAAGAACACTTCAGAAATCACAAACTGAAGCTAGAGTTGATGCTGAAAGTAAAGAGCAGAAGAAGAAAGGTGTAAAAAAATTGAACTTGCTTTCATTTGGGGAAGAAGCTGAAGAAGATGAAAAGGAATTGGCATCGGTGAAGCAAAAGATTAAGAGCAGTCACGATGTCTTGAACGATCCTCGACTTCTAAAGGAAGAAACACCTGATGGTGAACTGAGTTCGTCAAGAAGAGATCTGCAGTTGTCTGTTAGGGAGACACTTAACTCAAAGAAAGAAGAGCCTCAGAAAGATTCAGCACCTGGTAACATTGCTCGTCTTGATTCCAGTGATGATGATGAAGCAGATTTTGATTCAAGAATGCGCATGCAGATACTCAAAAAGCGGAAGGAGTTGGGTGATCTCCCTCCAAAGCCCAAGTTGCAAAAAGGAGGAGGAAGGTCGATTCCAGAGAATCATGATACATCAGCACCAAGGTCCAATGCTGTCAGTGCTGATGAGGATCAACAAAAGGTGGAAAAGTTGTCCATGAAGAAAAAGGGCGTAGGATCTGAAGCAAGAGCTGAACGAATGGCTAATGCAGATGCAGATCTGCAACTATTAAATGAAACTGAGAGAGGAAGACAATTGCAGAAGCAGAAGAAGCGCCGACTTCAGGGGCGCGAAGATGAAGTTCTGGCTAAACTTCAAAAATTTAAGAATTCTTTAGCAGCAAAGGAGACACCCCCTGCTGGCAAATCTGGAGATGTTAATAGTGAGTTGTCTGACTGGAAAGCTGTCAGTTTAAAATTTGACCCCGAGTCTGGCAAGGACCGCATGTCACGCAATGAGGACCCAAATGACTATGTTGTGCACGACCCACTTCTGGAAAAGGGGAAAGAGAAGTTTAATAGGATGATGGCCAAACAAAAGAGACGAGAACGAGAGTGGGCTGGGAGATCTCTTACTTGA 1179 0.4283 MASSGSPNSNGSQFFITLDRCDWLDRKHTIFGKVTGDTMYNLLRLGEVETDKNDRPLDPPKILSVEVLWNPFEDIVPRTLQKSQTEARVDAESKEQKKKGVKKLNLLSFGEEAEEDEKELASVKQKIKSSHDVLNDPRLLKEETPDGELSSSRRDLQLSVRETLNSKKEEPQKDSAPGNIARLDSSDDDEADFDSRMRMQILKKRKELGDLPPKPKLQKGGGRSIPENHDTSAPRSNAVSADEDQQKVEKLSMKKKGVGSEARAERMANADADLQLLNETERGRQLQKQKKRRLQGREDEVLAKLQKFKNSLAAKETPPAGKSGDVNSELSDWKAVSLKFDPESGKDRMSRNEDPNDYVVHDPLLEKGKEKFNRMMAKQKRREREWAGRSLT* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00588 392 MobiDBLite consensus disorder prediction 242 268 - -
Phac1g00588 392 MobiDBLite consensus disorder prediction 339 364 - -
Phac1g00588 392 SUPERFAMILY Cyclophilin-like 1 84 IPR029000 -
Phac1g00588 392 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 67 IPR002130 GO:0000413|GO:0003755
Phac1g00588 392 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 1 117 IPR044666 -
Phac1g00588 392 MobiDBLite consensus disorder prediction 160 175 - -
Phac1g00588 392 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 67 IPR002130 GO:0000413|GO:0003755
Phac1g00588 392 MobiDBLite consensus disorder prediction 125 150 - -
Phac1g00588 392 MobiDBLite consensus disorder prediction 183 213 - -
Phac1g00588 392 Gene3D - 1 82 IPR029000 -
Phac1g00588 392 MobiDBLite consensus disorder prediction 125 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00588 Phac-Chr1 4591388 4600757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00588 1 72 U-box Gene Family AT5G67530 43.056 3.76e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00588 K12737 - gmx:100793148 628.632