Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00573 ATGGTGAAACCGGCCATGACCACCGTTGATTCTTCTTCTTCTTCTTCGTCTTCTCCTCCTCCTGCTTCTTGCTATGACTCATTCTCCACCAACAATTCTAGTGGGTGTAAGGTGTACAAAGGAGTGAGGAAGAGAAAATGGGGGAAATGGGTGTCTGAAATCAGGCTTCCGAATAGCCGTGAGAGAATATGGTTGGGGTCTTATGACACGCAGGAGAAAGCAGCAAGGGCCTTTGATGCTGCTCTCTATTGCCTGCGTGGGAAGGCTGCGAGTTTCAACTTCCCCGACACACCTCAGCACATGGAAATGGAGTCGGAGAAGATACCGTGTAGCCACCAGGAGATCCAAGAGGTGGCGGCGAAGTTTGCCAATAAGGAGGGGGTTTTGGCAGAAGAAGAAGAAGAAGAAGTAGAAGCTCGAAGTGAGTCCAAGTCTAACGACACCACAGACACAAACACGAACTTTCCTATTTATGATGGTGGGACAAATAATGATGCGCAAGTGGACCAAGACACCATGGATTGGACATTTATGAACATGTTGGATGACTTGAATGTCTCTGATTTTGGCCTCTATTTTGGAGCTGAGAAGGCTGAGTTTTTGTGCCCCACAACACAAACTCCACTGCTCTTTCACAATGGAGATGAGATTGAAGTTGATGATCATGATCATGATGCTTTTTCTAACCACTCTTTTCTTTGGAGTTGGAACTTTTGA 717 0.463 MVKPAMTTVDSSSSSSSSPPPASCYDSFSTNNSSGCKVYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGKAASFNFPDTPQHMEMESEKIPCSHQEIQEVAAKFANKEGVLAEEEEEEVEARSESKSNDTTDTNTNFPIYDGGTNNDAQVDQDTMDWTFMNMLDDLNVSDFGLYFGAEKAEFLCPTTQTPLLFHNGDEIEVDDHDHDAFSNHSFLWSWNF* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00573 238 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Phac1g00573 238 MobiDBLite consensus disorder prediction 146 165 - -
Phac1g00573 238 MobiDBLite consensus disorder prediction 128 165 - -
Phac1g00573 238 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Phac1g00573 238 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Phac1g00573 238 SUPERFAMILY DNA-binding domain 38 96 IPR016177 GO:0003677
Phac1g00573 238 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Phac1g00573 238 FunFam Ethylene-responsive transcription factor 2 37 96 - -
Phac1g00573 238 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Phac1g00573 238 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 188 - -
Phac1g00573 238 Coils Coil 115 135 - -
Phac1g00573 238 MobiDBLite consensus disorder prediction 1 33 - -
Phac1g00573 238 CDD AP2 39 97 IPR001471 GO:0003700|GO:0006355
Phac1g00573 238 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00573 Phac-Chr1 4484352 4485309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00573 39 124 AP2-EREBP Transcription Factor Family AT1G19210 75.581 8.69e-40 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac1g00573 AP2 3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00573 - - vum:124843463 381.719