Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00555 ATGCTATTGGGGAATAATACAGAACAAAGTGATCCAGCAAATAGGTCCATTGGAGGATTTTCAGTTATAGAATCAGCAAAAAGAGTCCTTGAGTTTCTTTGTCCCGGAACAGTTTCTTGTGCTGACATAATTGCTTTGGCTGCAAGAGATGCTGTTGAACTCACTGGTGGTCCCATGATTCAAATTCCCACTGGAAGGAGAGATGGCATGGTTTCAGTTGCTTCAAACGTTAGACCCAACATTTTGGACACAAGTTTTACAATGGATGAGATGATTAAGCGATTCTCCAATAAAGGGTTGTCCTTATTTGACCTTGTCATCCTTTCAGGGGCTCACACCATAGGAAGGGCTCATTGCAGCTCATTCAGGGATAGGTTCCAACAGGACTCCAAGGGAAAGCTGAAACTCATTGACAAAAGCCTTGATAGTAGCTATGCTGATGAGCTAATGAAGGAATGTCCCTTAAGTGCAAGCCCATCAGTAGAAGTTAACAATGATCCTGAAACTTCCATGGTCTTTGACAACCACTACTACAGAAATCTTCTCACCAACAAGGGGTTGTTCCAATCTGACTCTGCCTTGCTAAGTGACAACAGAACAAGGAAATTGGTGGAGGACTTGGCAAATGATCAACAGTTTTTCTTTGAAAGTTGGGGCCAGTCTTTCATGAAACTCACTAGTATTGGAGTCAAAACTGGTGATGAAGGTGAAATTAGGCGCTTCTGTTCATCAACTAATGCATAA 744 0.4207 MLLGNNTEQSDPANRSIGGFSVIESAKRVLEFLCPGTVSCADIIALAARDAVELTGGPMIQIPTGRRDGMVSVASNVRPNILDTSFTMDEMIKRFSNKGLSLFDLVILSGAHTIGRAHCSSFRDRFQQDSKGKLKLIDKSLDSSYADELMKECPLSASPSVEVNNDPETSMVFDNHYYRNLLTNKGLFQSDSALLSDNRTRKLVEDLANDQQFFFESWGQSFMKLTSIGVKTGDEGEIRRFCSSTNA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00555 247 Gene3D - 6 246 - -
Phac1g00555 247 PANTHER - 5 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Plant peroxidase signature 180 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Plant peroxidase signature 18 31 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Plant peroxidase signature 37 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Plant peroxidase signature 103 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Plant peroxidase signature 220 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Plant peroxidase signature 56 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Haem peroxidase superfamily signature 56 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Haem peroxidase superfamily signature 166 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Haem peroxidase superfamily signature 104 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 PRINTS Haem peroxidase superfamily signature 38 55 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 SUPERFAMILY Heme-dependent peroxidases 5 246 IPR010255 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 Gene3D Peroxidase, domain 2 82 225 - -
Phac1g00555 247 Pfam Peroxidase 5 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 CDD secretory_peroxidase 4 245 IPR033905 GO:0004601|GO:0042744
Phac1g00555 247 ProSitePatterns Peroxidases proximal heme-ligand signature. 104 114 IPR019793 -
Phac1g00555 247 ProSiteProfiles Plant heme peroxidase family profile. 1 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Phac1g00555 247 FunFam Peroxidase 82 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00555 Phac-Chr1 4276219 4278935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00555 1 246 Peroxidase AT4G31760 64.634 2.28e-120 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00555 K00430 K18328 gmx:100793440 453.751