Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00544 ATGGAACCAACATGCTTGGATACTTCACTCAATCTCAACGTTGATCCTTCTTCTCTGCACATGGATGGGGTTTTGGTGGAAGAGTTGCGGAGACTGAGTTGTGAGAACAAGAGGTTGACTGAGATGTTGACCCAACTGTGTGACAACTATATGGTTTTGCAGAAGCAATTGACCCAGTTGATCAACACAAATTTTGAGCAAGACCAACTTGAATCACGCAAGAGAAAAGCAGAGAGTGAATGTTGTACCAACAGATTTGGTATAGTTAACAATAACAATGGTGAGTGCAGCTCCATAACAGAGGATTCCTTCAAAAGGTACAAGGATTTCAACTCCTCCCCAAAGGTTTCCAAGGTTCTTGTAAAGACCGAAGCTTCCAATAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAAAAGGTCACAAGGGATAACCCTTCTCCTAGAGCTTACTTCAAGTGCTCCTTTGCCCCAAGCTGCCCTGTTAAAAAGAAGGTGCAAAGGAGTTTAGAGGACCCTACAATACTTGTTACAACATATGAAGGAGAGCATAACCATGGTCATCAAAGAGGTGAAATATCAGTTGGTTCAAAGCAAAGTGAAGGAACCAAAGGGTCAAGTCCAGTTTCTTCACCAACACACACAATTCGAAGTGCTTGCCCCACTGTAACGCTTGATTTGGTCAAATCAGGATTGGTTGAAAGTGCACAAAAGTCATCTATCCAACAATTTTTGGTTCAACAAATGGCTACTTCTTTGACAAGGGATCCCAATTTCACTACAGCACTTGCCACTGCCATTTCAGGAAAAATTCTAGAGCCCAAATGGTGA 843 0.4187 MEPTCLDTSLNLNVDPSSLHMDGVLVEELRRLSCENKRLTEMLTQLCDNYMVLQKQLTQLINTNFEQDQLESRKRKAESECCTNRFGIVNNNNGECSSITEDSFKRYKDFNSSPKVSKVLVKTEASNNSLYVMDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSLEDPTILVTTYEGEHNHGHQRGEISVGSKQSEGTKGSSPVSSPTHTIRSACPTVTLDLVKSGLVESAQKSSIQQFLVQQMATSLTRDPNFTTALATAISGKILEPKW* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00544 280 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00544 280 MobiDBLite consensus disorder prediction 184 220 - -
Phac1g00544 280 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 24 275 IPR044810 GO:0003700
Phac1g00544 280 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00544 280 Coils Coil 29 49 - -
Phac1g00544 280 ProSiteProfiles WRKY domain profile. 127 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00544 280 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00544 280 MobiDBLite consensus disorder prediction 196 220 - -
Phac1g00544 280 SUPERFAMILY WRKY DNA-binding domain 130 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00544 280 FunFam WRKY transcription factor 40 117 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00544 Phac-Chr1 4102926 4104388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00544 6 277 WRKY Transcription Factor Family AT1G80840 46.207 1.30e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g00544 WRKY 8.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00544 - - gmx:100810978 455.292