Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Phac1g00542 | ATGCTCGTTCAAGTCCTCAACACTGCAAACATGGTTGATGAAAAGGTGGAAGCACTTAAATCTGAATTACAGAGAGTGAGAGAGGAGAATAACGCTCTTAGAGTGATGTTTGAAGTTCTAAGCAGCAAGTACACAGTGCTTGAGTCCCATCTTCAAGAGATAAACAAGGAACAACACAAGGGAATGAGTTCAAATCAAAGAGGATCAGTAACAGAACCTATCTTGGATGCCAACAAGAGACGGAGACTAGAGTTTCCCACAGCAAAAAAACCACTACAAATCTTTGTCAGAACACACCCCACGGATGATAGTTTGATAGTAAAAGATGGATATCAGTGGAGGAAGTATGGACAGAAGGTCACCAAAGACAATGCTTCACCAAGAGCTTACTTCAGGTGCTCCATGGCTCCCATTTGCCCAGCCAAAAAGAAGGTGCAAAGATGTTTACATGATAAGTCTATCCTGGTTGCAACTTATGATGGAGAGCACAACCATGGTGCCCTTCATGAGTCATCTTCTTCCACACCTAGAGGCTCATCAGTGGCCAATCAGTTGCCTAGCATGGCAAATGACAAAGAAGCGATGGACATTTTGGCTCTTTCTAGATGGTCTCAAACAGATAGCAGACACATTGAAGAAGTAATGCATCAAGATAACAGTGGCAGCAACTTCAAAGTTGAAGAATATGTAAGTTCTCTAATCAAAGATCCTGAGTTCACCATGTCATTAGCAGAAGCAGTTGCCCGCACCATCACTGGAGAGCTCAAGCAGCAAGATCTAGACCTAAATTTGAATATTCCGGAAGAGTGA | 810 | 0.4272 | MLVQVLNTANMVDEKVEALKSELQRVREENNALRVMFEVLSSKYTVLESHLQEINKEQHKGMSSNQRGSVTEPILDANKRRRLEFPTAKKPLQIFVRTHPTDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHESSSSTPRGSSVANQLPSMANDKEAMDILALSRWSQTDSRHIEEVMHQDNSGSNFKVEEYVSSLIKDPEFTMSLAEAVARTITGELKQQDLDLNLNIPEE* | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Phac1g00542 | 269 | Pfam | WRKY DNA -binding domain | 108 | 165 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g00542 | 269 | SUPERFAMILY | WRKY DNA-binding domain | 103 | 166 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g00542 | 269 | MobiDBLite | consensus disorder prediction | 168 | 184 | - | - | |
Phac1g00542 | 269 | SMART | WRKY_cls | 107 | 167 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g00542 | 269 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 14 | 253 | IPR044810 | GO:0003700 | |
Phac1g00542 | 269 | Coils | Coil | 9 | 36 | - | - | |
Phac1g00542 | 269 | ProSiteProfiles | WRKY domain profile. | 102 | 168 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Phac1g00542 | 269 | MobiDBLite | consensus disorder prediction | 165 | 184 | - | - | |
Phac1g00542 | 269 | Gene3D | WRKY domain | 93 | 167 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Phac1g00542 | Phac-Chr1 | 4088945 | 4090876 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Phac1g00542 | 13 | 259 | WRKY Transcription Factor Family | AT1G80840 | 36.678 | 2.92e-45 | 152 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Phac1g00542 | WRKY | 2.7e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Phac1g00542 | - | - | gmx:100170679 | 414.461 |