Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00542 ATGCTCGTTCAAGTCCTCAACACTGCAAACATGGTTGATGAAAAGGTGGAAGCACTTAAATCTGAATTACAGAGAGTGAGAGAGGAGAATAACGCTCTTAGAGTGATGTTTGAAGTTCTAAGCAGCAAGTACACAGTGCTTGAGTCCCATCTTCAAGAGATAAACAAGGAACAACACAAGGGAATGAGTTCAAATCAAAGAGGATCAGTAACAGAACCTATCTTGGATGCCAACAAGAGACGGAGACTAGAGTTTCCCACAGCAAAAAAACCACTACAAATCTTTGTCAGAACACACCCCACGGATGATAGTTTGATAGTAAAAGATGGATATCAGTGGAGGAAGTATGGACAGAAGGTCACCAAAGACAATGCTTCACCAAGAGCTTACTTCAGGTGCTCCATGGCTCCCATTTGCCCAGCCAAAAAGAAGGTGCAAAGATGTTTACATGATAAGTCTATCCTGGTTGCAACTTATGATGGAGAGCACAACCATGGTGCCCTTCATGAGTCATCTTCTTCCACACCTAGAGGCTCATCAGTGGCCAATCAGTTGCCTAGCATGGCAAATGACAAAGAAGCGATGGACATTTTGGCTCTTTCTAGATGGTCTCAAACAGATAGCAGACACATTGAAGAAGTAATGCATCAAGATAACAGTGGCAGCAACTTCAAAGTTGAAGAATATGTAAGTTCTCTAATCAAAGATCCTGAGTTCACCATGTCATTAGCAGAAGCAGTTGCCCGCACCATCACTGGAGAGCTCAAGCAGCAAGATCTAGACCTAAATTTGAATATTCCGGAAGAGTGA 810 0.4272 MLVQVLNTANMVDEKVEALKSELQRVREENNALRVMFEVLSSKYTVLESHLQEINKEQHKGMSSNQRGSVTEPILDANKRRRLEFPTAKKPLQIFVRTHPTDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHESSSSTPRGSSVANQLPSMANDKEAMDILALSRWSQTDSRHIEEVMHQDNSGSNFKVEEYVSSLIKDPEFTMSLAEAVARTITGELKQQDLDLNLNIPEE* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00542 269 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00542 269 SUPERFAMILY WRKY DNA-binding domain 103 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00542 269 MobiDBLite consensus disorder prediction 168 184 - -
Phac1g00542 269 SMART WRKY_cls 107 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00542 269 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 253 IPR044810 GO:0003700
Phac1g00542 269 Coils Coil 9 36 - -
Phac1g00542 269 ProSiteProfiles WRKY domain profile. 102 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00542 269 MobiDBLite consensus disorder prediction 165 184 - -
Phac1g00542 269 Gene3D WRKY domain 93 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00542 Phac-Chr1 4088945 4090876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00542 13 259 WRKY Transcription Factor Family AT1G80840 36.678 2.92e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g00542 WRKY 2.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00542 - - gmx:100170679 414.461