Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00541 ATGTTTGAAGTTCTAAGCAGCAAGTACACAGTGCTTGAGTCCCATCTTCAAGAGATAAACAAGGAACAACACAAGGGAATGAGTTCAAATCAAAGAGGATCAGTAACAGAACCTATCTTGGATGCCAACAAGAGACGGAGACTAGAGTTTCCCACAGCAAAAAAACCACTACAAATCTTTGTCAGAACACACCCCACGGATGATAGTTTGATAGTAAAAGATGGATATCAGTGGAGGAAGTATGGACAGAAGGTCACCAAAGACAATGCTTCACCAAGAGCTTACTTCAGGTGCTCCATGGCTCCCATTTGCCCAGCCAAAAAGAAGGTGCAAAGATGTTTACATGATAAGTCTATCCTGGTTGCAACTTATGATGGAGAGCACAACCATGGTGCCCTTCATGAGTCATCTTCTTCCACACCTAGAGGCTCATCAGTGGCCAATCAGTTGCCTAGCATGGCAAATGACAAAGAAGCGATGGACATTTTGGCTCTTTCTAGATGGTCTCAAACAGATAGCAGACACATTGAAGAAGTAATGCATCAAGATAACAGTGGCAGCAACTTCAAAGTTGAAGAATATGTAAGTTCTCTAATCAAAGATCCTGAGTTCACCATGTCATTAGCAGAAGCAGTTGCCCGCACCATCACTGGAGAGCTCAAGCAGCAAGATCTAGACCTAAATTTGAATATTCCGGAAGAGTGA 705 0.4284 MFEVLSSKYTVLESHLQEINKEQHKGMSSNQRGSVTEPILDANKRRRLEFPTAKKPLQIFVRTHPTDDSLIVKDGYQWRKYGQKVTKDNASPRAYFRCSMAPICPAKKKVQRCLHDKSILVATYDGEHNHGALHESSSSTPRGSSVANQLPSMANDKEAMDILALSRWSQTDSRHIEEVMHQDNSGSNFKVEEYVSSLIKDPEFTMSLAEAVARTITGELKQQDLDLNLNIPEE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00541 234 MobiDBLite consensus disorder prediction 130 149 - -
Phac1g00541 234 Gene3D WRKY domain 58 132 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00541 234 Pfam WRKY DNA -binding domain 73 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00541 234 SUPERFAMILY WRKY DNA-binding domain 68 131 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00541 234 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 218 IPR044810 GO:0003700
Phac1g00541 234 SMART WRKY_cls 72 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00541 234 ProSiteProfiles WRKY domain profile. 67 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00541 234 MobiDBLite consensus disorder prediction 133 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00541 Phac-Chr1 4088945 4090876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00541 44 224 WRKY Transcription Factor Family AT1G80840 42.211 5.24e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g00541 WRKY 2.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00541 - - gmx:100170679 370.548