Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00523 ATGAGTTTCTTAGCTCCGGCAAAAGTTGAGACAAAAAAACTGCCATTGAGAATGAGATTTGTAGACATGGTGACCATTTTTGTTCTATTCTTGGCCATTCCTTTTCCTTTCCTTAAAACAGTGGAATCACTAAATTTCAACATTACAAACTTCGATGACCCTGAGAGTGCAAAAAACATGGCATACATGGGTGACGGCAAACCAAATAAGGGTTCCATAGACCTTAACATAGTCTCGTATTATTTCCGTGTTGGGAGAGCCTTGTATGCACAACCTTTGCACCTTTGGGACTCATCTTCAAGTGTTGTAACAGACTTCACCACACGCTTCACCTTTTCTATTGAAAAAGGAAACGATGAAACCGCTAGCTACGCCGATGGTTTCGCCTTCTACATAGCCCCTCACGGCTATCAGATTCCTCCAAATGGTGCAGGTGGCACTTTTGGCCTTTTCAATGGCACTTTCAATAGCTTCCTTCCCCAAAATCGCATCCTTGCGGTTGAGTTTGACACACTTAATGGCACCATTGACCCTCCCATGCAGCACGTTGGCATAGATGATAACTCCCTCAAATCCGTGACTACTGGCAAGTTTGACATCGACGAAAATCTGGGAAAGAAATGTAACGCTTTGGTAACCTACAATGCTTCCAACAAGACACTCTCTGTGGCTTGGTCCTTCAACGGAACCGCAACGATACACTCCAATTCTTCACTTTCTTACAAGATCGACCTCTTGAGAACTCTACCCGAGTGGGTTGATGTTGGGTTCTCTGCTTCCACCGGGGAACTCACTGAACGAAACCTCATTCACTCGTGGGAGTTCAGTTCCACGTTGAATTCTTCCACTGCTTCCAATGACAATCCCTCTGGTGGCAATGAGAAGAGCGGGAAAGGGTTGAGCAAGGTTATGATTGTTGTGGTGGTGACGTGTTTTATGGTTTTTGTGGCCGTGGCAGCAAATGTTGCAGCTTGGATAATAATCATGAAGAAGAGAAGGGGTAAGGATGATTCTGGTTATGATGATGGTGGTAAAGGTAGGTCTGCTAGGTTTAATCTGGACAGGGAAACTCTACCAAGAAGGTTTGATTACACAGAACTAGTTGAAGCCACCAAAGGGTTTGCTGATGAAACAAGGCTTGGAAGAGGAGGCTCGGGACAGGTTTACAAAGGGGTTTTGAGCTATTTAGGAAGGGTTGTTGCTGTGAAAAGGATTTTCACCAACTTTGAAAATTCAGAGAGGGTTTTCATCAACGAGGTTAGGATCATAAGCCGTCTTATACACAGAAACTTGGTGCAGTTCGTAGGGTGGTGCCACGAGCAAGGAGAGTTTCTGTTGGTTTTTGACTACATGCCTAATGGAAGCCTCGACACTCATCTCTTCGGTGACAAAAAACCTTTGACCTGGGATATTAGGTACAAGGTAGCATTAGGCGTGGCTTTGGCACTTCGTTATCTTCATGAGGATGCCGAACAGAGTGTTCTTCATAGGGATATTAAGTCGGCTAATGTGTTGTTGGACACAGATTTTAGCACGAAGCTTGGAGATTTTGGGATGGCCAAGTTGGTGGATCCAAGGTTGAAGACTCAGAGGACAGGAGTGGTGGGGACTTACGGGTACCTTGCCCCAGAATACATGAATGGAGGTAGGGCTAGCAAGGAATCAGACATGTATAGTTTTGGTGTTGTGGCTCTTGAAATTGCATGTGGAAGGAGGACTTATCTGGATGGGGAGTTTCATATGCCTCTCATGAACTGGGTGTGGAAAAAATATGTGGAAGGGAATGTGATGGACGTTGTTGATGAGAAATTGAACAAGGAATTTGATGTGGATGAAATGAGAAGCCTGATCATTGTGGGGTTGTGGTGTACTAACCCTAACGACAAGGAAAGGCCAAAGGCAGCACAAGTGATAAAGGTTCTTGAGCTAGAAGCACCATTGCCAGAGCTTCCACTTGATATGCATGATCGTCCTCCTCTTTCTCTTAGTACTTATAATCATGCACAAGCCACTCATAATTCCTTACAATCACTACCCTTCACCAACAGTTTTGTCAGTATTGGACGTTAG 2070 0.4459 MSFLAPAKVETKKLPLRMRFVDMVTIFVLFLAIPFPFLKTVESLNFNITNFDDPESAKNMAYMGDGKPNKGSIDLNIVSYYFRVGRALYAQPLHLWDSSSSVVTDFTTRFTFSIEKGNDETASYADGFAFYIAPHGYQIPPNGAGGTFGLFNGTFNSFLPQNRILAVEFDTLNGTIDPPMQHVGIDDNSLKSVTTGKFDIDENLGKKCNALVTYNASNKTLSVAWSFNGTATIHSNSSLSYKIDLLRTLPEWVDVGFSASTGELTERNLIHSWEFSSTLNSSTASNDNPSGGNEKSGKGLSKVMIVVVVTCFMVFVAVAANVAAWIIIMKKRRGKDDSGYDDGGKGRSARFNLDRETLPRRFDYTELVEATKGFADETRLGRGGSGQVYKGVLSYLGRVVAVKRIFTNFENSERVFINEVRIISRLIHRNLVQFVGWCHEQGEFLLVFDYMPNGSLDTHLFGDKKPLTWDIRYKVALGVALALRYLHEDAEQSVLHRDIKSANVLLDTDFSTKLGDFGMAKLVDPRLKTQRTGVVGTYGYLAPEYMNGGRASKESDMYSFGVVALEIACGRRTYLDGEFHMPLMNWVWKKYVEGNVMDVVDEKLNKEFDVDEMRSLIIVGLWCTNPNDKERPKAAQVIKVLELEAPLPELPLDMHDRPPLSLSTYNHAQATHNSLQSLPFTNSFVSIGR* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00523 689 Pfam Legume lectin domain 43 287 IPR001220 GO:0030246
Phac1g00523 689 SMART serkin_6 374 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00523 689 ProSiteProfiles Protein kinase domain profile. 374 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00523 689 SUPERFAMILY Protein kinase-like (PK-like) 357 667 IPR011009 -
Phac1g00523 689 FunFam L-type lectin-domain containing receptor kinase IX.1 451 651 - -
Phac1g00523 689 FunFam L-type lectin-domain containing receptor kinase IX.1 359 450 - -
Phac1g00523 689 FunFam L-type lectin-domain containing receptor kinase IX.1 42 294 - -
Phac1g00523 689 ProSitePatterns Legume lectins alpha-chain signature. 249 258 IPR000985 -
Phac1g00523 689 Pfam Protein kinase domain 375 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00523 689 Gene3D - 41 291 - -
Phac1g00523 689 CDD lectin_legume_LecRK_Arcelin_ConA 44 279 IPR001220 GO:0030246
Phac1g00523 689 ProSitePatterns Protein kinases ATP-binding region signature. 380 403 IPR017441 GO:0005524
Phac1g00523 689 ProSitePatterns Legume lectins beta-chain signature. 165 171 IPR019825 -
Phac1g00523 689 Gene3D Transferase(Phosphotransferase) domain 1 451 656 - -
Phac1g00523 689 PANTHER - 76 646 - -
Phac1g00523 689 CDD STKc_IRAK 380 642 - -
Phac1g00523 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672|GO:0006468
Phac1g00523 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 42 281 IPR013320 -
Phac1g00523 689 Gene3D Phosphorylase Kinase; domain 1 349 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00523 Phac-Chr1 3934507 3937052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00523 24 654 Receptor kinase-like Gene Family AT5G10530 43.214 1.36e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac1g00523 Pkinase 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00523 - - gmx:100305427 1025