Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00522 ATGTTAGCTACCTCACAAAATTCCCACTACCTCAGAAGTTTTCTTCTTCTGCTTATCCTTCCAAGAACCATAGCTCAACCATTTTCCTTCAGCATAACTAACTTTGACGACACTGAAAACGCAGGCCTCATTGGATACGCTGGCGTAGCCAAGATTGAGAACGGAAGCATACTACTCAACTCACTCATCCATAGTGGAATTGGAAGAGCAGTCTATGGCCAACCTCTCCACCTCAAAAACTCTTCTAACGGAAAAATCACTGATTTTTCAACTCGTTTTTCATTCACTATCCAATCCCCTGACACCATTTACGGTGACGGATTTGGCTTCTACGTCGCACCTCTTTCCTACCAGATTCCGAACACCATGATAGCTGGTTCCGGTCTCGGCCTATACTATGCAAACATACCCATACTTGCTGTCGAATTTGACACTTTTATAAACGACTTGGACCCACCAATGCAGCACGTGGGGATCAACAATGGCTCTGTGGTATCTCTCAATTATACCAAGTTTGATATTGAGAGCAACAGAGGGAAGATGGGGCATGCGTTGATAACTTACAATGCTTCTGCCAAACTCCTTGCTGTCTCGTGGTTCTTTGATGGAACTAGTTCCGCTTCTACTCCTAACGCTTATCTTTCCTACCAGATCGACCTAGCGGAACTTCTACCGGAGTGGGTCGCTATTGGTTTTTCAGGTGCAACCGGATCATCCATTGAGGAAAATGTTATCCATTCATGGGAATTCAATTCTAGTCTAGATCTAATAAATTCCACGCATAGAGAGGCAAACAAAGAAAATGTTATCACAACAGAATACAAGGGTAGGGAAAAAGTAGTGGCTGTTGCAGTGATTTGGTCTATTATATTTGCGCTCGTGGTTATTAGTATTACGTGTTGGATGATGAAGAAGAGAAGAAACGAGGATGGATTTGGTTTTGACAGAGAAGCTACGCCTAGAAGGTTTGGTTATAACGAATTGGTTGCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTTGGAGAAGGTGGGCATGGACAAGTTTACAAAGGGTTTCTGAGTGATTTAGGGCGTGTGGTGGCGGTGAAAAGGATTTCTTCAGACGTGGAAGATTCGGAGAGAATATTTAGAAACGAAGTGAAGATTATTAGCAGACTTATACATAAAAACCTTGTGCAGTTCATTGGGTGGTGCGAGGAGGAAGGGAAGTTGTTTCTAGTTATGGATTACTTAGATAATGGAAGCCTTGAGACTCATCTCTTTGGGAACAGAAGGAGTTTGACATGGGGTGTGAGATATAGCATAGCATTAGGTGTGGTGAGAGCACTTGGTTATCTCCATGAAGACGTGGAGCAGTGTGTTCTTCACAGGGATATCAAGGCAGGTAATGTTTTGTTAGACAGGGATTTCAATGCAAAGGTTAGTGATTTTGGAATGGCGAAGTTGGTGGATCCAAGATTGAGGAGTGAGAAGACAAGGGTGGTGGGGACATATGGGTACCTGGCCCCTGAATATGTGAAGGAAGGAAGGGCTAGCAAGGAATCAGACATGTACAGTTTTGGGGTGTTGGCTTTGGAAATAGCATGTGGAAGGAGGACTTACCAGGATGTGGAGTGTAATCAGGTGCCTCTGAGGAATTGGGTATGGAAACATTATGTGAATGGAAAGATTTTGAATGCTGCTGATGAGAAATTGAAGAAGGATTTTGATGTGAGTGAAATGACATGTTTGCTCACTGTGGGAATATGGTGTACCCTGGAAGATCACAAGGAAAGACCAACAGCAGAAGAGGTTATTATTGTTCTTCAACAAAAAGTGTCATTGCCAATGCTTTACTAA 1842 0.4321 MLATSQNSHYLRSFLLLLILPRTIAQPFSFSITNFDDTENAGLIGYAGVAKIENGSILLNSLIHSGIGRAVYGQPLHLKNSSNGKITDFSTRFSFTIQSPDTIYGDGFGFYVAPLSYQIPNTMIAGSGLGLYYANIPILAVEFDTFINDLDPPMQHVGINNGSVVSLNYTKFDIESNRGKMGHALITYNASAKLLAVSWFFDGTSSASTPNAYLSYQIDLAELLPEWVAIGFSGATGSSIEENVIHSWEFNSSLDLINSTHREANKENVITTEYKGREKVVAVAVIWSIIFALVVISITCWMMKKRRNEDGFGFDREATPRRFGYNELVAATNGFADDRRLGEGGHGQVYKGFLSDLGRVVAVKRISSDVEDSERIFRNEVKIISRLIHKNLVQFIGWCEEEGKLFLVMDYLDNGSLETHLFGNRRSLTWGVRYSIALGVVRALGYLHEDVEQCVLHRDIKAGNVLLDRDFNAKVSDFGMAKLVDPRLRSEKTRVVGTYGYLAPEYVKEGRASKESDMYSFGVLALEIACGRRTYQDVECNQVPLRNWVWKHYVNGKILNAADEKLKKDFDVSEMTCLLTVGIWCTLEDHKERPTAEEVIIVLQQKVSLPMLY* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00522 613 CDD lectin_legume_LecRK_Arcelin_ConA 28 254 IPR001220 GO:0030246
Phac1g00522 613 FunFam L-type lectin-domain containing receptor kinase IX.1 412 613 - -
Phac1g00522 613 FunFam L-type lectin-domain containing receptor kinase IX.1 320 411 - -
Phac1g00522 613 Pfam Legume lectin domain 29 260 IPR001220 GO:0030246
Phac1g00522 613 ProSitePatterns Legume lectins alpha-chain signature. 224 233 IPR000985 -
Phac1g00522 613 Gene3D Phosphorylase Kinase; domain 1 320 411 - -
Phac1g00522 613 ProSiteProfiles Protein kinase domain profile. 335 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00522 613 Gene3D Transferase(Phosphotransferase) domain 1 412 612 - -
Phac1g00522 613 Pfam Protein kinase domain 336 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00522 613 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 257 IPR013320 -
Phac1g00522 613 SMART serkin_6 335 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00522 613 SUPERFAMILY Protein kinase-like (PK-like) 317 603 IPR011009 -
Phac1g00522 613 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Phac1g00522 613 Gene3D - 26 279 - -
Phac1g00522 613 PANTHER - 48 605 - -
Phac1g00522 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Phac1g00522 613 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00522 Phac-Chr1 3929981 3931822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00522 14 612 Receptor kinase-like Gene Family AT5G10530 41.176 2.17e-154 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac1g00522 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00522 - - vum:124841915 1011.52