Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00518 ATGTTGGCAACCTTTGAAAATTTCCACTACTTGAAAACTTTTCTTCTTTTGTTCATCCTCTTTATCCTTCCAATAAACTTAGTTCAACCATTTTCCTTCAGCATAACTAACTTTAACGACACTGAAAGTGCAAGCATCGTTGCATACACAGGCGTGGCCAAGATTGAGAACGGATCTGTAGTGCTCAACCCACTCATCGGCAATGGAGTTGGAAGAGCCATCTATGGCCAACCTCTACGCCTCAAAAACTCTTCTAACGGACATGTCACTGATTTTTCAACTCGATTTTCATTCACTATCGACGTACCTTCAGGAGTCAAGTACGGTGATGGCTTTGCCTTCTACTTGGCACCCCTTGCGTACCAGATTCCGACCACCACTGATGATGGCTCCCTTCTCGGCCTATACGATGACACCCAAAATAACATCCTTGCTGTCGAATTTGACACTTATGTAAACGAGTTAGACCCACCAGTGCAACACGTAGGGATCAACAATAACTCTGTGGCATCTCTCAACTATTCCAAGTTTGATATTGAGAGCAACACAGGGAAGATGGGGCATGCGTTGATAACTTATAATGCTTCTGCCAAACTCCTGGCTGTTTCGTGGTTATTTGATGGAACTAGTTCTGCTTCTTCTCCTAGCGATTATCTTTCGTACAATATTGACCTGTGGGCAATTTTACCGGAGTGGGTCAATGTTGGGTTTTCGGGTTCAACTGGGTCGTCCACTGAGAAAAATGTGATCCATTCCTGGGAGTTCAGTTCAAGCCTAGATATAAATTCTACGCATGCAGAGGAAAACAGAGAAAATGGCATCGCAACCAAATGCAAGATTCAGGTCAAAGTAGTAGTTGTGACAGTGGTTTGTTCTATTGTTTTCGTGATCGTGGTTATTAGTATTTCTTGGCTGATCATCAAAAGGAGAAGAACGGAGGATGGTTTTGGTTTCGATAGAGAAGTTATGCCTAGAAGGTTTGGTTATGGCGAAATAGTTTCAGCCACCAACGGGTTTGCAGATGATAGAAGGCTGGGAGAAGGAGGCTCTGGAGAAGTTTACAAAGGGTTTCTGAATGATGAAGGGCGCGTGGTTGCTGTGAAAAGGATTTTTTCTGATGTTGAAGATTCTGAGAGAATATTTAGAAACGAAGTGAAGATTATAAGTCGTCTTATACATAGAAACCTTGTGCAATTCATGGGGTGGTGCCAGGAGCAAGGGGAGCTGTTACTGGTTTTTGAGTACATGAGTAATGGAAGCCTTGACAATCATCTATTTGGCAACAGAAAACGTTTGACATGGGATGTGAGATACAAGATAGCATTAGGTGTGGCGAGAGCACTTCGTTATCTTCATGAAGACGCAGAGCAGTGTGTTGTTCATAGGGATATAAAGTCAGGTAATGTTTTGTTAGACACAGATTTCAATACAAAGATTAGTGACTTTGGGATAGCAAAGTTGGTGGATCCAAGATTGAGGACTCAGAAGACAAAGGTGGTGGGAACATATGGGTACCTAGCTCCAGAATATATAAACGAAGGGAGGGTTAGCAAAGAATCGGACATGTACAGTTTTGGGGTTTTGGCTTTGGAGATAGCATGTGGAAGGAGGACTCACCAGGATGGGGAAAGTAATCATGTGCCTTTGGTGAAATGGGTATGGAAAAATTATGTGGATGGGGAGATTTTGAATGCTGCTGATGAGGAATTGAAGATGGATTTTGACGTAAATGAAATGAGATGTTTACTCAGTGTAGGAATATGGTGTACCCATCAAGACCACAAGGAAAGGCCAACCTCAGAACAGGTTATAAATGTTCTAAAACAAGAAGTGCCATTGCCAATGTTTTCTGCAAAACTCATTGACAATGGGCAACCGGATTCCCTTGGATCGTCATCCAGAAAAGCATAA 1911 0.4244 MLATFENFHYLKTFLLLFILFILPINLVQPFSFSITNFNDTESASIVAYTGVAKIENGSVVLNPLIGNGVGRAIYGQPLRLKNSSNGHVTDFSTRFSFTIDVPSGVKYGDGFAFYLAPLAYQIPTTTDDGSLLGLYDDTQNNILAVEFDTYVNELDPPVQHVGINNNSVASLNYSKFDIESNTGKMGHALITYNASAKLLAVSWLFDGTSSASSPSDYLSYNIDLWAILPEWVNVGFSGSTGSSTEKNVIHSWEFSSSLDINSTHAEENRENGIATKCKIQVKVVVVTVVCSIVFVIVVISISWLIIKRRRTEDGFGFDREVMPRRFGYGEIVSATNGFADDRRLGEGGSGEVYKGFLNDEGRVVAVKRIFSDVEDSERIFRNEVKIISRLIHRNLVQFMGWCQEQGELLLVFEYMSNGSLDNHLFGNRKRLTWDVRYKIALGVARALRYLHEDAEQCVVHRDIKSGNVLLDTDFNTKISDFGIAKLVDPRLRTQKTKVVGTYGYLAPEYINEGRVSKESDMYSFGVLALEIACGRRTHQDGESNHVPLVKWVWKNYVDGEILNAADEELKMDFDVNEMRCLLSVGIWCTHQDHKERPTSEQVINVLKQEVPLPMFSAKLIDNGQPDSLGSSSRKA* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00518 636 Gene3D - 29 283 - -
Phac1g00518 636 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Phac1g00518 636 Pfam Protein kinase domain 340 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00518 636 SUPERFAMILY Protein kinase-like (PK-like) 323 613 IPR011009 -
Phac1g00518 636 FunFam L-type lectin-domain containing receptor kinase IX.1 29 273 - -
Phac1g00518 636 ProSiteProfiles Protein kinase domain profile. 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00518 636 CDD lectin_legume_LecRK_Arcelin_ConA 31 259 IPR001220 GO:0030246
Phac1g00518 636 FunFam L-type lectin-domain containing receptor kinase IX.1 324 415 - -
Phac1g00518 636 Gene3D Transferase(Phosphotransferase) domain 1 416 621 - -
Phac1g00518 636 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Phac1g00518 636 Pfam Legume lectin domain 32 267 IPR001220 GO:0030246
Phac1g00518 636 PANTHER - 51 611 - -
Phac1g00518 636 CDD STKc_IRAK 345 609 - -
Phac1g00518 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Phac1g00518 636 FunFam L-type lectin-domain containing receptor kinase IX.1 416 617 - -
Phac1g00518 636 SMART serkin_6 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00518 636 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 263 IPR013320 -
Phac1g00518 636 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Phac1g00518 636 ProSitePatterns Legume lectins alpha-chain signature. 229 238 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00518 Phac-Chr1 3863897 3866080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00518 16 620 Receptor kinase-like Gene Family AT5G10530 43.840 4.02e-162 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Phac1g00518 Pkinase 3.5e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00518 - - gmx:100801935 895.96