Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00516 ATGACAGACAACAATCCAAGACCACCACCTGATACACCTGACAGTGATGATTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTGGATGATTTTGAGTCTTTTTCTTCTGAGAATAATGTCTCAAACCAGGTTCATCTAAGTGGGTCTGGCGGAAGTGGAAGCTACTTTGAGGGGTCTTCCAACAATCCTAATGGACGTGAGAATAGGCAAGTTGTAAGAGAGAGAGTTGCATTCAAAACAATTTCAGAGATTGAAGTACTAGACGATGGATACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAACCCCAATCCAAGGAATTACTATAGATGTTCAGTGGATGGATGCTCTGTGAAGAAGAGAGTGGAGAGAGATAAGGATGATCCTAGGTGTGTTATAACAACCTACGAAGGCAGCCACACTCATCCAAGTTCTTCCTAG 459 0.4292 MTDNNPRPPPDTPDSDDFCNQWPFELSEYLQLDDFESFSSENNVSNQVHLSGSGGSGSYFEGSSNNPNGRENRQVVRERVAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCSVKKRVERDKDDPRCVITTYEGSHTHPSSS* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00516 152 Gene3D WRKY domain 78 144 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00516 152 MobiDBLite consensus disorder prediction 43 74 - -
Phac1g00516 152 SUPERFAMILY WRKY DNA-binding domain 84 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00516 152 MobiDBLite consensus disorder prediction 1 20 - -
Phac1g00516 152 FunFam WRKY transcription factor 57 77 151 - -
Phac1g00516 152 ProSiteProfiles WRKY domain profile. 86 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00516 152 SMART WRKY_cls 91 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00516 152 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 150 IPR044810 GO:0003700
Phac1g00516 152 MobiDBLite consensus disorder prediction 43 71 - -
Phac1g00516 152 Pfam WRKY DNA -binding domain 92 149 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00516 Phac-Chr1 3848037 3849483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00516 79 150 WRKY Transcription Factor Family AT5G26170 81.944 1.59e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g00516 WRKY 5.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00516 - - gmx:100796836 219.164