Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00515 ATGACAGACAACAATCCAAGACCACCACCTGATACACCTGACAGTGATGATTTCTGCAACCAGTGGCCTTTTGAGCTCTCTGAGTACTTGCAATTGGATGATTTTGAGTCTTTTTCTTCTGAGAATAATGTCTCAAACCAGGTTCATCTAAGTGGGTCTGGCGGAAGTGGAAGCTACTTTGAGGGGTCTTCCAACAGAGATCCTAATGGACGTGAGAATAGGCAAGTTGTAAGAGAGAGAGTTGCATTCAAAACAATTTCAGAGATTGAAGTACTAGACGATGGATACAGATGGAGGAAGTACGGAAAGAAAATGGTGAAGAACAACCCCAATCCAAGGAATTACTATAGATGTTCAGTGGATGGATGCTCTGTGAAGAAGAGAGTGGAGAGAGATAAGGATGATCCTAGGTGTGTTATAACAACCTACGAAGGCAGCCACACTCATCCAAGTTCTTCCTAG 462 0.4307 MTDNNPRPPPDTPDSDDFCNQWPFELSEYLQLDDFESFSSENNVSNQVHLSGSGGSGSYFEGSSNRDPNGRENRQVVRERVAFKTISEIEVLDDGYRWRKYGKKMVKNNPNPRNYYRCSVDGCSVKKRVERDKDDPRCVITTYEGSHTHPSSS* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00515 153 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 151 IPR044810 GO:0003700
Phac1g00515 153 SUPERFAMILY WRKY DNA-binding domain 85 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00515 153 Gene3D WRKY domain 79 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac1g00515 153 MobiDBLite consensus disorder prediction 1 20 - -
Phac1g00515 153 Pfam WRKY DNA -binding domain 93 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00515 153 FunFam WRKY transcription factor 57 78 152 - -
Phac1g00515 153 SMART WRKY_cls 92 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00515 153 MobiDBLite consensus disorder prediction 43 66 - -
Phac1g00515 153 ProSiteProfiles WRKY domain profile. 87 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac1g00515 153 MobiDBLite consensus disorder prediction 43 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00515 Phac-Chr1 3848037 3849483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00515 80 151 WRKY Transcription Factor Family AT5G26170 81.944 2.05e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac1g00515 WRKY 5.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00515 - - gmx:100796836 225.328