Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00509 ATGAGTTTCAAGAACAGCCCTAAAATTCAGCACAAGGGAGACTCTCCTTACCTGTCTCGACAGTCATCCAACCCTAGTTGTAGGGCCAAAGCACAGAAGAATGTGGGGCCACCTAGCCCTCTACTTGTAGGGTGCTGCAGAGGCTTCACCAATAGTAAGACTACAGGCTCCTCTGCTTCCACATCTCCACAACATCCAAAACAGCTACAGTACCAAAGATTACAACAAAAGGTGGAAGATTTGGAAAAGGAAGTGAGGAAGCAAAGAGAAGTAGGAGTGATGTACAAGAGAAGAATGGAAAGAACACAAGAGTACTTGAGACATTGTCTTGAGATAGCAGAAGAAAATGGAATATTGGATCTCACTCTGAACTACAATGGTGATTCTCAACAATCTCCACTCTCTCTTCACTCCATTTCCAGCCCTCAAATTCCCACTTCTCCACCACACCATGCCCACCACCCCAATCTTGCAACCATTATTCATCAAGCTAAAACCAATGGCTGGTACATTCATCCAAATGAGATTAAATTGGAAGAGAAAATTGGGGAAGGAAGCACCGCAGAGATTCACAGAGGAACATGGCGTGGATTTGAGGTCGCAGTGAAATGCATATCGCAAGACTTTTTCCGTCTAAACCAAAACGGCGTCGTTTACTTTTCCCAGGAGCTCGAAACGCTGTCGCGGCAGCGCCACAGGTTCGTGCTTCAGCTCATGGGCGCGTGTATCGAACCTCCCCACCACGCGTGGGTGGTGACGGAGTACCTGAGCACCACGCTGAAGGAGTGGCTCCATGGGCCTGGGAACCGGCGCAGGGAGCGGATGGTGCCACTTCCACCCTTGAAAGAGAGAGTGGGCCGGGCCTTGGAAATAGCCCAAGCCATGCAGTACTTGCACGAGCAAAAGCCCAAACTCCTTCACCGCGACTTGAAGCCCAGCAACATTTTCCTTGATGACGCCATGCACGTTAGAGTCGCGGATTTCGGCCACGCGCGGTTCTTGGGTGACGAAGAAATGGCCCTAACCGGAGAAACAGGAACATACGTTTACATGGCACCAGAGGTGATCCGATGTGAACCTTACAATGAAAATTGTGACGTATACAGTTTTGGTATCATACTGAACGAGCTACTAACTGGAAATTACCCTTATGTTGAGACAGAATATGGTCCCACCAAGATTGCCATGGAAGTTGTGGAGAGTAAGCTTCGACCTAAGCTTCCATGTGACGATGATGTTGGAAAACTGGGAGAGCTTCTTCACCTTATTTCTCTTTGTTGGGACCAAAATCCAACAACTCGACCATCCTTTGCTACAATCACCCTTTCTCTCAAAACTTATGCCAACAACAATCTCGTTTAG 1362 0.4809 MSFKNSPKIQHKGDSPYLSRQSSNPSCRAKAQKNVGPPSPLLVGCCRGFTNSKTTGSSASTSPQHPKQLQYQRLQQKVEDLEKEVRKQREVGVMYKRRMERTQEYLRHCLEIAEENGILDLTLNYNGDSQQSPLSLHSISSPQIPTSPPHHAHHPNLATIIHQAKTNGWYIHPNEIKLEEKIGEGSTAEIHRGTWRGFEVAVKCISQDFFRLNQNGVVYFSQELETLSRQRHRFVLQLMGACIEPPHHAWVVTEYLSTTLKEWLHGPGNRRRERMVPLPPLKERVGRALEIAQAMQYLHEQKPKLLHRDLKPSNIFLDDAMHVRVADFGHARFLGDEEMALTGETGTYVYMAPEVIRCEPYNENCDVYSFGIILNELLTGNYPYVETEYGPTKIAMEVVESKLRPKLPCDDDVGKLGELLHLISLCWDQNPTTRPSFATITLSLKTYANNNLV* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00509 453 ProSitePatterns Protein kinases ATP-binding region signature. 182 203 IPR017441 GO:0005524
Phac1g00509 453 Coils Coil 71 91 - -
Phac1g00509 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Phac1g00509 453 Gene3D Transferase(Phosphotransferase) domain 1 258 452 - -
Phac1g00509 453 Gene3D Phosphorylase Kinase; domain 1 155 257 - -
Phac1g00509 453 Pfam Protein kinase domain 178 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00509 453 SMART serkin_6 176 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00509 453 CDD STKc_MAP3K-like 182 444 - -
Phac1g00509 453 MobiDBLite consensus disorder prediction 15 30 - -
Phac1g00509 453 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 445 - -
Phac1g00509 453 SUPERFAMILY Protein kinase-like (PK-like) 147 440 IPR011009 -
Phac1g00509 453 ProSiteProfiles Protein kinase domain profile. 176 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00509 453 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00509 Phac-Chr1 3767131 3773297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00509 166 440 MAP Kinase Kinase Kinase AT2G17700 38.406 4.62e-51 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Phac1g00509 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00509 - - pvu:PHAVU_001G0393001 753.436