Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00498 ATGACAGGAGCAACGCTGTTGGAGATGAAGAAGTTATTCAGGGATGTGGATAATGTTCTATATGATTGGACAGACTCGCCATCATCAGATTATTGTGCCTGGAGAGGGATAACATGTGATAATGTCACATTTAATGTTGTTGCACTCAATCTTTCAGGGTTGAATCTTGATGGGGAAATTTCACCTGCAATAGGGAAGCTTCAGAGTTTAGTCTCTATTGACCTGAGAGAAAACAGGTTATCAGGGCAGATACCAGATGAGATTGGTGACTGTTCTTCATTGAAGAACTTGGACTTGTCATTTAATGAAATTAGAGGGGATATACCATTTTCTATTTCTAAATTAAAACAACTGGAGAACCTGATTTTGAAGAACAACCAGTTGATTGGACCGATTCCTTCAACTTTGTCTCAGATTCCTAATTTGAAGATTCTAGACCTGGCTCAAAATAATCTAAGTGGTGAAATACCAAGGCTTATATACTGGAACGAAGTTTTGCAGTATCTGGGCTTGAGAGGGAACAATTTGATTGGTTCACTATCACCAGACATGTGCCAGTTAACTGGGCTGTGGTATTTTGATGTGAGAAACAATAGCCTGACAGGAAGTATTCCAGAAAACATTGGCAATTGTACTACCTTCCAGGTTTTGGATTTATCCTACAACCAGCTAACTGGAGAGATACCATTCAATATTGGCTTCTTGCAAATAGCTACTTTGTCATTGCAAGGCAATAAACTCTCTGGGCATATTCCATCGGTGATTGGTCTCATGCAAGCACTTGCTGTCTTAGACTTGGGCTGTAACATGTTAAGTGGACCAATCCCTCCTATCTTGGGAAATTTGACCTACACAGAAAAATTATACTTGCATGGAAACAAGCTGACTGGCTTCATCCCCCCGGAGCTTGGAAATATGACAAAACTTCACTATTTAGAATTGAATGACAATCATTTAAGTGGACATATTCCCCCTGAGCTTGGAAAGCTTACTGATCTCTTTGACTTAAATGTTGCCAATAACAATCTCGAAGGAACAATTCCTAGCAATATTAGCTCGTGTAAAAATCTCAACAGCCTCAATGTGCATGGAAACAAGTTGAGTGGAACAATTCCCCCTGCTTTGCAAAGCTTGGAGAGCATGACCTCTTTGAATCTTTCTTCCAACAATCTTCAGGGTGCAATTCCAATTGAACTGTCACGGATTGGTAATTTGGATACACTGGATATTTCAAACAATCATTTAGTTGGATCCATTCCTTCTTCCCTTGGCGACTTGGAACATCTTCTGAAGTTGAATCTAAGCAGAAACAATTTGACTGGAGTTATTCCAGCAGAATTTGGAAATCTTAGAAGTGTCATGGAAATTGATCTTTCAAATAATCAACTATCTGGCCTGATTCCTGAAGAACTTAGCCAGCTTCAGAACATGATATCCCTGAGACTTGAAAACAACAAATTAACTGGTGATGTGGCGTCACTTTCGAATTGCCTTACTCTCTCTGTGCTTAATGTGTCCTATAACAAACTATTTGGTGTTATCCCCACTAGTAACAACTTTACAAGGTTTCCCCCTGACAGTTTCATCGGAAACCCTGGTCTTTGTGGAAATTGGCTGAATTTGCCGTGTCGTGGTTCTCGACCTGCAGAGCGAGTTACATTATCTAAGGCTGCCATTCTTGGAATTACTCTTGGTGCCCTTGTGATTCTTCTAATGGTATTGCTGGCAGCTTGCCGACCACACAGTCCTCCTTTTCCTGATGGATCACTTGACAAGCCAGTTAATTACTCACCTCCAAAACTAGTGATTCTTCATATGAATATGGCACTTCATGTGTATGAAGATATCATGAGGATGACAGAAAACCTGAGTGAGAAGTATATAATTGGATATGGTGCGTCAAGTACAGTTTATAAATGTGTTCTCAAGAATTGTAAGCCAGTGGCTATCAAGAGGATCTATTCTCACTATCCCCAATGCATTAAAGAATTTGAAACTGAACTCGAGACTGTTGGCAGCATTAAGCACCGGAATCTGGTCAGTCTCCAAGGCTACTCTTTGTCCCCTTATGGCCACCTTCTGTTTTATGACTACATGGACAATGGCAGTCTGTGGGATCTTCTTCATGATATGCATGGAACACCCTTCATTGAGAAGTATCTGCCACAATCTTCTGTTAAATGGCAGATTACTATTTTGGCCAAGGCAGCAACCAATGCTGTAATGGAAACAGTTGATCCAGACATTACTGCCACATGCAAGGACCTTGGAGCTGTAAAAAAGGTTTACCAGCTCGCTCTATTATGCACAAAGAGGCAGCCCGCTGACAGACCGACAATGCACGAAGTGACACGTGTACTTGGGAGCCTTGTGCCATCAAACACCCCTCCAAAACAACCAGCTGCACTACCTCCTGCTTCAAACCCATCTGCCAAAGTGCCATGCTACATGGATGAGTATGCAAACCTCAAGACTCCACACTTGGTGAACTGCCCCTCAATGAGCACCTCAGATGCACAGCTCTTCCTCAAGTTTGGAGAAGTAATCTCTCAGAACAGTGAGTGA 2565 0.416 MTGATLLEMKKLFRDVDNVLYDWTDSPSSDYCAWRGITCDNVTFNVVALNLSGLNLDGEISPAIGKLQSLVSIDLRENRLSGQIPDEIGDCSSLKNLDLSFNEIRGDIPFSISKLKQLENLILKNNQLIGPIPSTLSQIPNLKILDLAQNNLSGEIPRLIYWNEVLQYLGLRGNNLIGSLSPDMCQLTGLWYFDVRNNSLTGSIPENIGNCTTFQVLDLSYNQLTGEIPFNIGFLQIATLSLQGNKLSGHIPSVIGLMQALAVLDLGCNMLSGPIPPILGNLTYTEKLYLHGNKLTGFIPPELGNMTKLHYLELNDNHLSGHIPPELGKLTDLFDLNVANNNLEGTIPSNISSCKNLNSLNVHGNKLSGTIPPALQSLESMTSLNLSSNNLQGAIPIELSRIGNLDTLDISNNHLVGSIPSSLGDLEHLLKLNLSRNNLTGVIPAEFGNLRSVMEIDLSNNQLSGLIPEELSQLQNMISLRLENNKLTGDVASLSNCLTLSVLNVSYNKLFGVIPTSNNFTRFPPDSFIGNPGLCGNWLNLPCRGSRPAERVTLSKAAILGITLGALVILLMVLLAACRPHSPPFPDGSLDKPVNYSPPKLVILHMNMALHVYEDIMRMTENLSEKYIIGYGASSTVYKCVLKNCKPVAIKRIYSHYPQCIKEFETELETVGSIKHRNLVSLQGYSLSPYGHLLFYDYMDNGSLWDLLHDMHGTPFIEKYLPQSSVKWQITILAKAATNAVMETVDPDITATCKDLGAVKKVYQLALLCTKRQPADRPTMHEVTRVLGSLVPSNTPPKQPAALPPASNPSAKVPCYMDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00498 854 Gene3D Ribonuclease Inhibitor 3 162 IPR032675 -
Phac1g00498 854 Gene3D Ribonuclease Inhibitor 322 419 IPR032675 -
Phac1g00498 854 SUPERFAMILY L domain-like 5 235 - -
Phac1g00498 854 ProSitePatterns Protein kinases ATP-binding region signature. 629 651 IPR017441 GO:0005524
Phac1g00498 854 SUPERFAMILY Protein kinase-like (PK-like) 596 715 IPR011009 -
Phac1g00498 854 SUPERFAMILY RNI-like 180 512 - -
Phac1g00498 854 SMART LRR_typ_2 426 449 IPR003591 -
Phac1g00498 854 SMART LRR_typ_2 378 402 IPR003591 -
Phac1g00498 854 SMART LRR_typ_2 139 163 IPR003591 -
Phac1g00498 854 SMART LRR_typ_2 187 211 IPR003591 -
Phac1g00498 854 SMART LRR_typ_2 306 330 IPR003591 -
Phac1g00498 854 SMART LRR_typ_2 67 91 IPR003591 -
Phac1g00498 854 SMART LRR_typ_2 450 473 IPR003591 -
Phac1g00498 854 Pfam Protein kinase domain 626 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac1g00498 854 Gene3D Ribonuclease Inhibitor 237 321 IPR032675 -
Phac1g00498 854 Gene3D Ribonuclease Inhibitor 420 545 IPR032675 -
Phac1g00498 854 Pfam Leucine rich repeat 69 128 IPR001611 GO:0005515
Phac1g00498 854 Pfam Leucine rich repeat 404 463 IPR001611 GO:0005515
Phac1g00498 854 Pfam Leucine rich repeat 336 391 IPR001611 GO:0005515
Phac1g00498 854 Pfam Leucine rich repeat N-terminal domain 4 40 IPR013210 -
Phac1g00498 854 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 594 698 - -
Phac1g00498 854 Gene3D Phosphorylase Kinase; domain 1 596 695 - -
Phac1g00498 854 ProSiteProfiles Leucine-rich repeat profile. 93 116 IPR001611 GO:0005515
Phac1g00498 854 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 46 399 - -
Phac1g00498 854 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 1 163 - -
Phac1g00498 854 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 164 273 - -
Phac1g00498 854 Gene3D Transferase(Phosphotransferase) domain 1 696 799 - -
Phac1g00498 854 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Phac1g00498 854 Gene3D Ribonuclease Inhibitor 163 236 IPR032675 -
Phac1g00498 854 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 274 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00498 Phac-Chr1 3616250 3624518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00498 732 853 Receptor kinase-like Gene Family AT5G07180 46.721 7.58e-17 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Phac1g00498 Pkinase 3.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00498 K20718 - cpap:110809270 1384.78