Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00496 ATGAATCTGCTCCACGGCTCCAAGGTTTGGGTCGAGGACCGGGATTCTGCTTGGCTGCCAGCTGAAGTGCTCGATTCCGACGGTAACAAGATTCTGCTACTAACTGATTCCGGCAAGAAGGTGTTTGCTTCCAAGGAGAAACTGTTCCCGCGGGATGCTGATGAAGAGGAGCATGGTGGATTCGAAGACATGACGCGGTTGGCGTACTTGAACGAGCCGGGAGTGTTGTTCAATCTTCGAAGAAGATACGAGCTCAATGATATCTATACATATACAGGGAGCATTTTAATAGCCGTTAATCCGTTCACAAAGCTTCCACATTTGTATGATTCCCATATGATGGATGAATATAAGGGAATTCCACTGGGTGAGCTTAGTCCACATGTTTTTGCTGTCGCTGATGCATCTTACAGAGCAATGATGAATGAAGGTAAAAGTCAGTCTATCTTGGTCAGCGGCGAAAGTGGTGCTGGAAAAACTGAGACAACAAAATTGATCATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCCAATCCACTTTTAGAGGCATTTGGTAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATCAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGATAACGGATCCCGAGAGAAATTATCACTGCTTTTATCAGTTGTGTTCATTTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCAAGTCACTTCCACTATCTAAATCAAAGTAAAATCTATGAATTAGATGGTGTACGCAACTCAGAAGAATACCTGAAGACAAGGAGGGCAATGGATATTGTTGGCATTAGTCACGCAGATCAGGAAGCCATATTTCGTGTGTTAGCTGCAATTTTACATGTGGGCAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCATCGGCAGTAAAAAATGACAAATCAAGATTTCATTTACAGATGGCTGCTGATCTTTTCATGTGTGATGTAGACCTACTGCTGGCAACATTGTGTACTCGTTCAATACAAACTCGTGAAGGAAGTATCATCAAGGTCCTTGATTGCAATGCTGCTGTTGCTGGCCGTGATGCTTTGGCGAAAACTGTTTATGCCCGTTTATTTGATTGGCTTGTTGATAAGATCAATATGTCTGTTGGGCAAGACATCAATTCCAAGATACAGATCGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTTTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAGATGGAACAGGAGGAGTATGGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTGTAGATAACCAAGATGTTTTAGATTTAATTGAAAAGAAACCCATTGGTATCATTGCTCTGTTGGATGAAGCTTGTATGTTTCCAAAATCGACTCATGAAACATTCTCAACCAAGTTGTTTCAGCATTTCCGATCTCATCCTAGGTTGGGAAAGGAAAAGTTTTCACAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACGTATCATACAGATACCTTTTTAGACAAAAATCGTGATTATGTTGTAGTAGAACATTGCAATCTCTTATCTTCTTCAAAATGCCCTTTTGTTTCTGGTCTATTTCCTTTGCTACCTGAAGAATCTTCAAGATCATCATACAAGTTTTCTTCAGTAGCTGCCAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTAAACTCAACAGAGCCTCACTACATACGATGTGTGAAACCAAATTCTTTGAATCGACCACAAATATTTGAAAATGCAAGTGTCATACATCAGTTACGCTGTGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCTGGTTATCCCACTCGAAGAACTTACTCAGAGTTTGTGGATCGTTTTGGGTTGATAGCCCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCAACTGAGAAAATTTTGCAAAAGCTTAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAAGTATTTCTCAGGGCTGGCCAAATTGGTATTTTGGACTCGAGACGTGCTGAAGTTTTAGACAATGCTGCAAAGTGTATTCAGCGCCGATTGAGGACATTTATTACACATCAGTATTTCATAATTTTAAGATCTGCTGCGTTTTCTCTTCAGGCATGCTGCAGGGGTCACATTGCCCGGAAGATATATGCAGCTAAAAGGGAGACAGCAGCAGCTATCTCCATTCAGAAATATATTCGTATGTGGCTTACCAGGCATGCTCACTTAAAACTGAATTTTTCTGCTATTACCATACAATCTCATGTTCGTGGTTTTGTGACTCGCCAAAGATTCTTACATGTAAAAGAACATAGAGCTGCTACTTTTGTTCAGGCCTTTTGGAGGATGTCCAAGGCTAGGTCATCTTTCCTACGACATCAAACTTCAATTGTGGCAATACAATGCCTTTGGCGGTGCAAACAAGCAAAAAGAGAGTTACGAAGACTTAAACAAGAGGCAAATGAAGCTGGTGCTCTCCGTTTAGCCAAGAGTAAACTGGAGAAGCAGTTGGAAGATCTCACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAATGAAGAGGCTAAAAAAATAGAGATATCCAAACTTCAAAAGATGTTGGAAGCTTTGAATCTTGAATTAGATGCTGCTAAATTGGCAAAAATTAATGAGTGCAACAAGAATGCTGTTCTTCAAAATCAATTAGAATTGTCAGTAAAGGAAAAGTCTGCTTTGAAACGAGAGCTAGTAGCAGTGGATGAATTGCGAAAGGAAAATGCTTTATTAAAGGTTTCATTGGATGCATTTGAAAGGAAGTACATGACCTTAGAGCTTGAGCTTGTGAATGCTCAAAAAGGTCGGGATGAAAACATGGAGAAGCTGAGAGAGTTAGAACAGAAGTGTTCTCAACTCGAGCAAAATGAAAAAAAGCTTGAGGAAAAGTTAATGAGTTTGGAGGATGAAAATCGTGTGCTTCGTCAGAAAGCCTTAAGTACCCCTCTTAAGAGTAACCGTACAGGTTTTGCCAAGTCAATGTCAGAAAAATACTCAAGTGCAATTACCTCCCGCACTGAACGAAAGACCACATATGAGTCACCCACACCCACAAAACTTATTGCCCCTTTTACATTAGGCTTGACAGACTCTCGTCGATCTAAGTTAACTGCAGAGAAGCACCAGGATAACTATGAATTTCTCTCAAAGTGTATAAAAGAAAATTTGGGATTTAAAAATGGTAAACCTATTGCTGCTCGTATTATATATAAATGTCTGCTTCATTGGCATTCATTTGAATCTGAGCGCACAACCATTTTTGATTCAATCATCGAAGGCATAAATGAGGCTCTAAAGTGCATTTTGCATCAGGTTAGGGTGGATGACATTATCCTGCCATATTGGCTGTCCAATACCTCTGCGCTTCTGTGCCTGTTACAGAGGAACTTACGTTCAAATGGTTTTTTAACTACCACTGCTCAGCGTTATCCTGGATCATCTGGTTTAACCAGCCGGACTGGGCATGTACCAAAATCTCCGTTGCAGTTTATTGGATTTGATGATGGTGTATCGCATGTGGAGGCAAGATATCCTGCTATACTTTTTAAACAACAGCTAACTGCTTGTGTAGAGAAGATTTTTGGTCTTTTACGTGACAATTTGAAAAAAGAACTTTCTCCAGTGCTGGGATCATGTATTCAGGCACCTAAAACAGGACGAGGAGTGCAAGGGGCAAAACTGTCTAGATCTCCTCGTGGGATTCCCCAACAATCATCTAGTGGTCAATGGGATAACATTGTCAAATTTTTGGATTCTCTCATGAGCAAACTTCGTGGAAATCATGTGCCATCCTTCTTCATCCGTAAACTAGTTACACAGGTGTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTTTTGCGTCGGGAATGTTGCACTTTCTCAAATGGTGAATATATGAAGTCTGGTCTAGCCGAACTGGAAAAATGGATAGTCAATGCAACGGAGGAGTATGCAGGGACATCCTGGCATGAGCTCAATTACATACGACAAGCTGTTGGGTTCTTGGTAATACACCAGAAAAGAAAGAAATCTTTGGAAGAGATTCGAAAAGATCTTTGTCCGGCATTGACAGTGAGGCAAATCTATCGAATCAGTACGATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCCAATGAGGTGGTTAGTGAAATGAGGGAAATTGTCAGCAAGGACAATCAGAACCTGCCCTCAAATTCTTTCTTATTGGATGATGATCTGAGCATTCCTTTCTCTGCTGAAGACATAGATATGGCTATTCCTGCCATAGATCTTGATGAGATTCATCTTCCAGAATTCGTGTCCGAATATTCCTGCGCTCAGTTTCTTAGTTCACATCAGAAGTAA 4569 0.4025 MNLLHGSKVWVEDRDSAWLPAEVLDSDGNKILLLTDSGKKVFASKEKLFPRDADEEEHGGFEDMTRLAYLNEPGVLFNLRRRYELNDIYTYTGSILIAVNPFTKLPHLYDSHMMDEYKGIPLGELSPHVFAVADASYRAMMNEGKSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSFERDAEKYKLGHPSHFHYLNQSKIYELDGVRNSEEYLKTRRAMDIVGISHADQEAIFRVLAAILHVGNIEFSPGKEHDSSAVKNDKSRFHLQMAADLFMCDVDLLLATLCTRSIQTREGSIIKVLDCNAAVAGRDALAKTVYARLFDWLVDKINMSVGQDINSKIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYGKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFRSHPRLGKEKFSQTDFTVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVSGLFPLLPEESSRSSYKFSSVAARFKQQLQALMETLNSTEPHYIRCVKPNSLNRPQIFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFITHQYFIILRSAAFSLQACCRGHIARKIYAAKRETAAAISIQKYIRMWLTRHAHLKLNFSAITIQSHVRGFVTRQRFLHVKEHRAATFVQAFWRMSKARSSFLRHQTSIVAIQCLWRCKQAKRELRRLKQEANEAGALRLAKSKLEKQLEDLTWRLHLEKKIRVSNEEAKKIEISKLQKMLEALNLELDAAKLAKINECNKNAVLQNQLELSVKEKSALKRELVAVDELRKENALLKVSLDAFERKYMTLELELVNAQKGRDENMEKLRELEQKCSQLEQNEKKLEEKLMSLEDENRVLRQKALSTPLKSNRTGFAKSMSEKYSSAITSRTERKTTYESPTPTKLIAPFTLGLTDSRRSKLTAEKHQDNYEFLSKCIKENLGFKNGKPIAARIIYKCLLHWHSFESERTTIFDSIIEGINEALKCILHQVRVDDIILPYWLSNTSALLCLLQRNLRSNGFLTTTAQRYPGSSGLTSRTGHVPKSPLQFIGFDDGVSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPVLGSCIQAPKTGRGVQGAKLSRSPRGIPQQSSSGQWDNIVKFLDSLMSKLRGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYMKSGLAELEKWIVNATEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRKDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLPSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIHLPEFVSEYSCAQFLSSHQK* 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00496 1522 ProSiteProfiles Dilute domain profile. 1159 1465 IPR002710 -
Phac1g00496 1522 Gene3D Kinesin motor domain 62 659 IPR036961 -
Phac1g00496 1522 CDD MyosinXI_CBD 1110 1488 IPR037975 GO:0007015
Phac1g00496 1522 Gene3D - 831 879 - -
Phac1g00496 1522 Gene3D - 731 781 - -
Phac1g00496 1522 Gene3D - 782 830 - -
Phac1g00496 1522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 778 827 IPR027417 -
Phac1g00496 1522 Pfam DIL domain 1341 1444 IPR002710 -
Phac1g00496 1522 Pfam Myosin head (motor domain) 62 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 778 IPR027417 -
Phac1g00496 1522 Gene3D - 435 620 - -
Phac1g00496 1522 Coils Coil 948 968 - -
Phac1g00496 1522 PANTHER MYOSIN 802 1454 - -
Phac1g00496 1522 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Phac1g00496 1522 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 827 878 IPR027417 -
Phac1g00496 1522 Gene3D - 664 730 - -
Phac1g00496 1522 Coils Coil 857 894 - -
Phac1g00496 1522 Coils Coil 913 940 - -
Phac1g00496 1522 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Phac1g00496 1522 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Phac1g00496 1522 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Phac1g00496 1522 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Phac1g00496 1522 Gene3D - 249 306 - -
Phac1g00496 1522 SMART iq_5 850 872 IPR000048 GO:0005515
Phac1g00496 1522 SMART iq_5 802 824 IPR000048 GO:0005515
Phac1g00496 1522 SMART iq_5 754 776 IPR000048 GO:0005515
Phac1g00496 1522 SMART iq_5 827 849 IPR000048 GO:0005515
Phac1g00496 1522 SMART iq_5 779 801 IPR000048 GO:0005515
Phac1g00496 1522 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Phac1g00496 1522 FunFam Myosin heavy chain 249 303 - -
Phac1g00496 1522 SMART DIL_2 1340 1447 IPR002710 -
Phac1g00496 1522 Pfam IQ calmodulin-binding motif 756 775 IPR000048 GO:0005515
Phac1g00496 1522 Pfam IQ calmodulin-binding motif 829 848 IPR000048 GO:0005515
Phac1g00496 1522 Pfam IQ calmodulin-binding motif 806 823 IPR000048 GO:0005515
Phac1g00496 1522 Pfam IQ calmodulin-binding motif 781 799 IPR000048 GO:0005515
Phac1g00496 1522 Coils Coil 972 1048 - -
Phac1g00496 1522 CDD MYSc_Myo11 73 717 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00496 Phac-Chr1 3559519 3613207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00496 1 1517 Myosins gene family AT4G33200 72.182 0.0 2248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00496 K10357 - gmx:100790815 2786.52