Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00484 ATGGGTGCATCTGGAAAATGGGTGAAGGCGTTGATCGGACTTAACACCAAGAACGAACTTGGGGGGAAGAAGAAGAAGTGGAGGCTGTGGAAGAGTTCTTCTGCAGGAGAGAACAGATCTCAAGACTTCGACTATGGCAGTGTGGCTTCCGATTCTTTCACCGCTGCAGTGGCCACAGTTGTCAGAGCTCCACCTAAGGATTTCAAACTCCTCAAGAAGGAATGGGCTGCCACCCGAATCCAAACTGCTTTCCGCGCCTTCTTGGCAAGAAGGGCATTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTGAGGGGTAGACTTGTGAGGAAGCAGGCTGCAGTCACGTTGAGGTGCATGCAGGCCTTGGTTCGTGTCCAGGCACGTGTGAGGGCGCGGCGCGTGCGAATGTCCATGGAGGGCCAAGCAGTGCAAAACATGCTCAATGAACGCCGCACCAAGGCTGAACTCTATAAGGAAGCTGAGGATGGTTGGTGTGATATCAAAGGATCATTGGAAGATGTCAAGACAAAACTACAAATGAGGCAAGAGGGAGCTTTCAAGAGGGAGAGAGCAATTGCATACTCTCTTGCCCACAAGCAATGGAGATCAACACCCTTTTCAAATTCAAGAGCAAACACCTCTCTCAAGAAGCAAGAGATAGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCAAAGCCATGGGAGAGTAGATTGATGGAACAAACTCATCATCATGCTGATGCCACAGAGCAAACTCCTCCACCAAAGAAATGCGTGGACTCCTCAAATTCAAAAAATATTTCAGAACCATGCAATGTGAAAGTCAGAAAGAACAATGTGAGCACAAGGGTTTCAGCTATACCTCCCCATATTGGGCAAGCCACTCGTTCATCCTCAAGTCCTAGTTCAGAGTTTCACTATGATGAGAGCTCTAATTCATCTTCAATATGCACATCCATGACACCAATATCTGGGAGTGTTTCATTGCATTGTGAGAGGACAGAGGATAGTAACAATAGTAGTACTACGAGGCCAAGTTACATGAACCTGACAGAGTCAACCAAGGCAAAGCAGAAAAGCAGCAGTCATCAGAGCAATAGATCTCAGAGGCAACAGTCCATGGATGAGTTCCAGTTTCTGAAAAGAACAGCAGTTTTCTCAAATGGAGATTCCAAAAGCACTGGTGCTTCTGACCCTTCAACCAACTTTTGTAGGCCACTTTACCTACCCACCTACATGGATAAGAAGCCACGGTGA 1281 0.4778 MGASGKWVKALIGLNTKNELGGKKKKWRLWKSSSAGENRSQDFDYGSVASDSFTAAVATVVRAPPKDFKLLKKEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRTKAELYKEAEDGWCDIKGSLEDVKTKLQMRQEGAFKRERAIAYSLAHKQWRSTPFSNSRANTSLKKQEIDKANWGWSWLERWMAAKPWESRLMEQTHHHADATEQTPPPKKCVDSSNSKNISEPCNVKVRKNNVSTRVSAIPPHIGQATRSSSSPSSEFHYDESSNSSSICTSMTPISGSVSLHCERTEDSNNSSTTRPSYMNLTESTKAKQKSSSHQSNRSQRQQSMDEFQFLKRTAVFSNGDSKSTGASDPSTNFCRPLYLPTYMDKKPR* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00484 426 MobiDBLite consensus disorder prediction 360 409 - -
Phac1g00484 426 Pfam IQ calmodulin-binding motif 97 114 IPR000048 GO:0005515
Phac1g00484 426 Pfam IQ calmodulin-binding motif 75 94 IPR000048 GO:0005515
Phac1g00484 426 ProSiteProfiles IQ motif profile. 73 101 IPR000048 GO:0005515
Phac1g00484 426 MobiDBLite consensus disorder prediction 360 426 - -
Phac1g00484 426 SMART iq_5 95 116 IPR000048 GO:0005515
Phac1g00484 426 SMART iq_5 72 94 IPR000048 GO:0005515
Phac1g00484 426 ProSiteProfiles IQ motif profile. 97 124 IPR000048 GO:0005515
Phac1g00484 426 MobiDBLite consensus disorder prediction 263 327 - -
Phac1g00484 426 MobiDBLite consensus disorder prediction 249 327 - -
Phac1g00484 426 Pfam Protein of unknown function (DUF4005) 317 402 IPR025064 -
Phac1g00484 426 PANTHER IQ-DOMAIN 5-RELATED 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00484 Phac-Chr1 3452646 3455943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00484 1 426 IQD Protein Family AT2G26180 58.784 7.68e-139 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00484 - - gmx:100787102 668.307