Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00465 ATGACTCCTTATTCTCTCCATTCACCAGCTCCTTCCATGCAACCTCAAACCCAAATCTTCATTTCTCCTACTAATCAGGACTGCCCTACCTTTTTCAACATATTTGATCCTAGGAAAACCATAGATATTGCAGGCTTCAGACAAAATTATCATCAGGCAAGATATCATGCTTCATACTTATTTGATGAGATGGTATTGCATGATGGATCATCAAGCAATAACAATCTGAATTCACCTGAGCCAGTTATGGTTGATCCAATTAGCAGCACAAGTGAGGGCAATTTGGCCTCATACAAAATGGATGAGGAAGACATAAAAAATGGTCACGGGTCTGGGAAATGGATGTCTTCAAAGATGAGGTTAATGAGAAAAATGATGAGAAGGAGTATGAGTCCAACCACTGACAGATTGAATCCACAAGGGCAAGAAAGCAGATACAGCCAAAGAAGCCCTCGAAACAACACCAGTAACACCACTAGGGTTTGTTCCGACTGTAACACAAGCACTACCCCACTTTGGAGGAGTGGCCCTAAGGGTCCTAAGTCGCTATGCAATGCCTGTGGAATTAGACAGAGGAAGGCAAGAAGGGCAATGGCTGAAGCTTCAAATGATTTGGTGACTCCCATAAACTCAGTATGTGCAAAAACCAGAGTGCACAACAAGGAAAAGAAGTCTCGTGCAAATCATTTTGCACAGTTGAAGAACAAGTACAAGTCCACTACTACTACTGCTACTGCAGGGTCATCTGAAGGGGTGAGAAAGATTGAATATTTCAAGGACATTGCCATAAGTTTGAGGAGTAAAAACTCTTCTTTCCAACAAGTGTTTCCACGGGATGAAGTAGCTGAGGCAGCAATGCTTCTGATGGAGTTATCTTGTGGTTTTGTCCACTGA 894 0.4239 MTPYSLHSPAPSMQPQTQIFISPTNQDCPTFFNIFDPRKTIDIAGFRQNYHQARYHASYLFDEMVLHDGSSSNNNLNSPEPVMVDPISSTSEGNLASYKMDEEDIKNGHGSGKWMSSKMRLMRKMMRRSMSPTTDRLNPQGQESRYSQRSPRNNTSNTTRVCSDCNTSTTPLWRSGPKGPKSLCNACGIRQRKARRAMAEASNDLVTPINSVCAKTRVHNKEKKSRANHFAQLKNKYKSTTTTATAGSSEGVRKIEYFKDIAISLRSKNSSFQQVFPRDEVAEAAMLLMELSCGFVH* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00465 297 ProSiteProfiles GATA-type zinc finger domain profile. 156 192 IPR000679 GO:0006355|GO:0043565
Phac1g00465 297 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 22 297 - -
Phac1g00465 297 MobiDBLite consensus disorder prediction 128 179 - -
Phac1g00465 297 MobiDBLite consensus disorder prediction 131 175 - -
Phac1g00465 297 ProSitePatterns GATA-type zinc finger domain. 162 187 IPR000679 GO:0006355|GO:0043565
Phac1g00465 297 SMART GATA_3 156 207 IPR000679 GO:0006355|GO:0043565
Phac1g00465 297 CDD ZnF_GATA 161 198 IPR000679 GO:0006355|GO:0043565
Phac1g00465 297 Pfam GATA zinc finger 162 195 IPR000679 GO:0006355|GO:0043565
Phac1g00465 297 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 156 196 - -
Phac1g00465 297 Gene3D - 152 241 IPR013088 GO:0006355|GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00465 108 297 C2C2-Gata Transcription Factor Family AT4G26150 39.269 1.28e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac1g00465 GATA 2.7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00465 - - vra:106764137 448.358