Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00446 ATGGAGAATAATATGTACAGTGCTTCACTGGACATTTCTGGCAGAAATTCTGCTGTCATAGAAGAAATTGCACAGCATTTAGCACCGAAGCCACTGATTCAATGCTACTCATTTGACCTCAATAACCAAAACCACATTATAAATGGAATTCCAGTACTTGCTGCAGAACAAGGTGAATCTACAAGTGATGTCCATGTAGATGGTTGCTTCATAAACCCTGCTAGAATTTCTGATTCCAATTCATTTGTCACAATACAAGGAAAGAGTATTGTAGGAGATGTGTCAAATCCCATTAACATCAGTGCCATTCAAGAGCATTTAGCTGGAGGAAGGCAAATTGCTTCTTCTGATGCACTTGCTGATAGAATAGGCCTTCAAGATAATCTGCAGAGTTCAGCAGCTTTGCCTCATTCAATGAGTGCATTGGAGGCACTGGGGCCATACATCTTCAATAATTGGCAAGATACATCAAACCCTTTGGCTGCAACTTTTGGTGATCATGCCTATGATGAATTATCAGGTATTCACAAGTGGAATGTGAGCAAGTTTCTGAAAGCTCCAGAGGCCAATGGGACTGAGATCCAGGCTTATTCTTCCATAGGAAACCTGGTTCAAAATGGATGGACATCATCAAATGTTGCAAGCTTGGGCAATTTTGCCTTTAATTCCTCTAATTGTAGTAAAGATCTGTCATTAAGTCTTGCAAGATCTCCTCCAACTACAGGTCAGTGCTCAGAGATGAGCTGCTCCAACGCATCTCGTAGCATGAATGGAACAAGTTCAGGCTTGGATCAACCTTCCTGCAGCAGCAAGGAACTGTCTATGAGATTAAGTTCTAACAAACATGTCCAGTTTTCACCAGCAATATTGGGGTCCAGATATCTTGCTGGAGTTCAAGAGATATTTGCTCAAATTGCCACATATTCATTTGAAAATGTAGAGCTGATAAATTATTCAGCTTCTGGTGTTAGAGCAGGAGGAAATAAGTCAGCTTCAGCTTTCACACCAAATAGAAGGGTAGCGAATAATCAAAATGAAAATTCCATTTATGGAGCACATGTAGAAGAAACTCCATCGGAAAGACATGCAGCTGACTCAAACAAATCCCAACTTCTCATGCTTCTACAGCTGGTGGACAATGGATATAGTCAGTGTTTGGATGAGGTTCATACTGTGGTATCTGCATTCCATGCTGCTACTGAGTTGGATCCACACATGCATGCACATTTTGCACTTCAAACCATCTCTCTCTTATACAAGGACTTGAGAGAGAGGATTAGCAATTGTATTCTTGCCATGGGACCAGATTTTAACAGCTTGTGTTCAGAAGAGGAGAAGGAATGGTCTCTTGAAACTTCATTCATTCAAAAGCAATGGGCTCTGCAGCAGTTGAAGAGAAAAGATCAGCTATGGAGACCCCAAAGGGGCTTGCCAGAGAGATCTGTCTCAGTTCTACGCGCTTGGATGTTTCAGAATTTCCTCCATCCGTATCCTAAAGATGCAGAGAAGCATTTATTGGCAGTAAAAAGTGGGTTGACAAGAAGCCAGGTATCCAATTGGTTTATCAATGCACGTGTTCGGCTATGGAAGCCTATGATTGAAGAAATGTATGCTGAAATGAGTAGAAGAAAAGCTTGTAGAAATGAAGAAGGATTGGAGAGCACTCACAGAAGCAGGATAAACATGAACAGTCAAATGTTGAATATCAATTGA 1713 0.411 MENNMYSASLDISGRNSAVIEEIAQHLAPKPLIQCYSFDLNNQNHIINGIPVLAAEQGESTSDVHVDGCFINPARISDSNSFVTIQGKSIVGDVSNPINISAIQEHLAGGRQIASSDALADRIGLQDNLQSSAALPHSMSALEALGPYIFNNWQDTSNPLAATFGDHAYDELSGIHKWNVSKFLKAPEANGTEIQAYSSIGNLVQNGWTSSNVASLGNFAFNSSNCSKDLSLSLARSPPTTGQCSEMSCSNASRSMNGTSSGLDQPSCSSKELSMRLSSNKHVQFSPAILGSRYLAGVQEIFAQIATYSFENVELINYSASGVRAGGNKSASAFTPNRRVANNQNENSIYGAHVEETPSERHAADSNKSQLLMLLQLVDNGYSQCLDEVHTVVSAFHAATELDPHMHAHFALQTISLLYKDLRERISNCILAMGPDFNSLCSEEEKEWSLETSFIQKQWALQQLKRKDQLWRPQRGLPERSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMSRRKACRNEEGLESTHRSRINMNSQMLNIN* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00446 570 CDD homeodomain 471 532 IPR001356 GO:0003677
Phac1g00446 570 SMART prehox3 283 428 IPR006563 -
Phac1g00446 570 Pfam Associated with HOX 289 427 IPR006563 -
Phac1g00446 570 MobiDBLite consensus disorder prediction 241 269 - -
Phac1g00446 570 SUPERFAMILY Homeodomain-like 473 540 IPR009057 -
Phac1g00446 570 ProSiteProfiles 'Homeobox' domain profile. 468 531 IPR001356 GO:0003677
Phac1g00446 570 Gene3D - 474 553 - -
Phac1g00446 570 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 246 553 - -
Phac1g00446 570 Pfam Homeobox KN domain 488 527 IPR008422 GO:0003677|GO:0006355
Phac1g00446 570 SMART HOX_1 471 535 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00446 Phac-Chr1 3135007 3139117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00446 188 544 Homeobox Transcription Factor Family AT4G32980 50.689 3.00e-102 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac1g00446 POX 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00446 - - gmx:100812648 951.814