Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00439 ATGGGTATCTGCATATCAGTTTCAGAAAAAGATGATGATGATGATGAGAATGTGACAATATTTGAAGAAAGGAAGAAGGTCCCAAATGGGAGTCAGAGACTTTTCTCTGTTTACTCCAAACAGGGTACCAAAGGACTCAACCAAGATGCTGCCTCCATTCACCAGGATTATGGAATGGAAGATGGAACATATTGTGGTGTTTATGATGGTCATGGAGGAAATGGACACAGAGTGAGCAAAATGGTAAGTAGTCGATTATCTTCCCTAATACTGGACCAAATGAATGTTCTTGAAAAGATCGATGCTATAGAAAATGGTTATTACAACACCACCTCAAAAAACCATGTTGGCACAATGAAAAAGGACTCAGCTGCAAACAACTTTCAGAAATGGAAAGAAGCAATTGTTAGTGCTTTCAAGGTGATGGAAAAAGAGGTCAAGCTTCAACTTAATCTAGATTGCTCTAGCAGTGGAACCACTGCTGTAGTTATCATAAAACAGGGTGAAGGTCTTGTCATAGCAAATCTGGGTGACTCAAGAGCAGTGATGGGAACAATATGTGATGAAAAACTCATTGCCACTCAGTTAACCACAGATTTGAAGCCTGAATTACCTCGAGAAGCAGAAAGAATAAGAAGGTGCAATGGTTGTGTGTGTGCATCGAAGGAAGAACCAGAAATCCAGAGAGTGTGGATTCCAAACAATGATAATTCCCCTGGCCTAGCCATGTCTCGATCTTTTGGAGATTTCTTGCTCAAGAATCATGGTGTTATTGCTGTTCCAGATATTTCTTATCACCCTCTAACATCAAGTGACCAATTTATTGTTCTTGCTAGTGATGGGGTGTGGGATGTACTTAACAACAATGAGGTTGCATCAATTGTGTGGAGTGCAGAGAGTGAAGAGGTTGCAGCAAGAGCAGTGGTGGAAGCAGCCACTGCTGCATGGAAAGACAAGTTTCCTTCCTATATGGCAGATGACTGCACGGTGGCTTGTCTCTTCCTGCACCAGAAACCACAACCTCAGCCATTTCAAAACTAA 1041 0.4159 MGICISVSEKDDDDDENVTIFEERKKVPNGSQRLFSVYSKQGTKGLNQDAASIHQDYGMEDGTYCGVYDGHGGNGHRVSKMVSSRLSSLILDQMNVLEKIDAIENGYYNTTSKNHVGTMKKDSAANNFQKWKEAIVSAFKVMEKEVKLQLNLDCSSSGTTAVVIIKQGEGLVIANLGDSRAVMGTICDEKLIATQLTTDLKPELPREAERIRRCNGCVCASKEEPEIQRVWIPNNDNSPGLAMSRSFGDFLLKNHGVIAVPDISYHPLTSSDQFIVLASDGVWDVLNNNEVASIVWSAESEEVAARAVVEAATAAWKDKFPSYMADDCTVACLFLHQKPQPQPFQN* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00439 346 SUPERFAMILY PP2C-like 30 337 IPR036457 -
Phac1g00439 346 Gene3D - 16 338 IPR036457 -
Phac1g00439 346 PANTHER PROTEIN PHOSPHATASE 35 333 IPR015655 GO:0004722|GO:0006470
Phac1g00439 346 CDD PP2Cc 33 297 IPR001932 -
Phac1g00439 346 SMART PP2C_4 24 333 IPR001932 -
Phac1g00439 346 ProSiteProfiles PPM-type phosphatase domain profile. 34 335 IPR001932 -
Phac1g00439 346 Pfam Protein phosphatase 2C 117 313 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00439 Phac-Chr1 3107403 3110799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00439 1 341 PP2C-type Phosphatase Gene Family AT5G26010 48.305 8.24e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00439 - - gmx:100815312 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac1g00439 1 3107403 3110799 Phac1g00439 1 3107403 3110799 ECH