Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00419 ATGAGTTTTCATGATACACCAAACACAGGACTTGGTCTTGCTCTTGGCCTTGCTCTTGTTACCTTCCATGATCAATCAGAGAATTGCATGAAGAGTGATGACACCCCCTTGAGAGAAAGCCACAAGATCAGAGGGGTGGAGAATCCATCAAAATGTAACAAGAAATACCCTTCACTTACATTAGGACCACCAGAAGATGATGATGATGATGAAGTCAAAAATGATCAACCAAGTTCAAAAACTGAGTCCTATGAATATTTTCCTCCCCAAGTTTCTTCTCCTAGTGTTGTGTCTTCATTCTCCAACTCCTCTAGCATCAAGAGGGAGAGAGAACATGCCTTGGGAGAAGAATTTGAGGTAGAAATAGAGAAGGTTCCATCAAGGGTAGGTGATGCAGATGAAGATGGTAACCCCAGGAAGAAACTTCGACTCACCAAAGAACAATCAGCAATCTTGGAAGAAAACTTCAGACAGCATTCTACTCTCAATCCGAAGCAAAAGCAAGAATTGGCAATCAATCTGAATCTGCGAACGAGACAAGTAGAGGTGTGGTTTCAGAACAGGAGAGCCAGGTAA 576 0.4236 MSFHDTPNTGLGLALGLALVTFHDQSENCMKSDDTPLRESHKIRGVENPSKCNKKYPSLTLGPPEDDDDDEVKNDQPSSKTESYEYFPPQVSSPSVVSSFSNSSSIKREREHALGEEFEVEIEKVPSRVGDADEDGNPRKKLRLTKEQSAILEENFRQHSTLNPKQKQELAINLNLRTRQVEVWFQNRRAR* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00419 191 MobiDBLite consensus disorder prediction 79 100 - -
Phac1g00419 191 CDD homeodomain 138 191 IPR001356 GO:0003677
Phac1g00419 191 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 12 191 - -
Phac1g00419 191 MobiDBLite consensus disorder prediction 29 49 - -
Phac1g00419 191 Pfam Homeodomain 139 191 IPR001356 GO:0003677
Phac1g00419 191 MobiDBLite consensus disorder prediction 29 100 - -
Phac1g00419 191 Gene3D - 130 191 - -
Phac1g00419 191 SUPERFAMILY Homeodomain-like 135 191 IPR009057 -
Phac1g00419 191 ProSiteProfiles 'Homeobox' domain profile. 135 191 IPR001356 GO:0003677
Phac1g00419 191 SMART HOX_1 137 191 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00419 Phac-Chr1 2907160 2908646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00419 1 191 Homeobox Transcription Factor Family AT4G37790 42.439 4.58e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac1g00419 Homeodomain 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00419 K09338 - gmx:100807072 276.944