Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00418 ATGAGTTTTCATGATACACCAAACACAGGACTTGGTCTTGCTCTTGGCCTTGCTCTTGTTACCTTCCATGATCAATCAGAGAATTGCATGAAGAGTGATGACACCCCCTTGAGAGAAAGCCACAAGATCAGAGGGGTGGAGAATCCATCAAAATGTAACAAGAAATACCCTTCACTTACATTAGGACCACCAGAAGATGATGATGATGATGAAGTCAAAAATGATCAACCAAGTTCAAAAACTGAGTCCTATGAATATTTTCCTCCCCAAGTTTCTTCTCCTAGTGTTGTGTCTTCATTCTCCAACTCCTCTAGCATCAAGAGGGAGAGAGAACATGCCTTGGGAGAAGAATTTGAGGTAGAAATAGAGAAGGTTCCATCAAGGGTAGGTGATGCAGATGAAGATGGTAACCCCAGGAAGAAACTTCGACTCACCAAAGAACAATCAGCAATCTTGGAAGAAAACTTCAGACAGCATTCTACTCTCAATCCGAAGCAAAAGCAAGAATTGGCAATCAATCTGAATCTGCGAACGAGACAAGTAGAGGTGTGGTTTCAGAACAGGAGAGCCAGGACAAAGCTAAAGCAAACTGAGTCAGATTGTGATCTATTAAAGAAGTGTTGTGACACTCTCACAGAAGAAAACAAGAGGCTGCAAAAGGAGCTTCAAGAACTGAAGTCAATGCAAGCAATGCCAGTGCCTCTTTACATGCAGATTCCAGCAGCCACACTTTCCCTATGCCCTTCTTGTGAGAGAATTTGTGGGAGTAAAAGTGATGATGAGAATAGCAACACCAATAGTTCTACATTACTTTTTGGTTCAAAAACACATCATCATAACTTTCACAAAAGTAACTATCCATTCTCCCACTCTCCATCTGCAGCATGCTAA 891 0.4164 MSFHDTPNTGLGLALGLALVTFHDQSENCMKSDDTPLRESHKIRGVENPSKCNKKYPSLTLGPPEDDDDDEVKNDQPSSKTESYEYFPPQVSSPSVVSSFSNSSSIKREREHALGEEFEVEIEKVPSRVGDADEDGNPRKKLRLTKEQSAILEENFRQHSTLNPKQKQELAINLNLRTRQVEVWFQNRRARTKLKQTESDCDLLKKCCDTLTEENKRLQKELQELKSMQAMPVPLYMQIPAATLSLCPSCERICGSKSDDENSNTNSSTLLFGSKTHHHNFHKSNYPFSHSPSAAC* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00418 296 Pfam Homeodomain 139 193 IPR001356 GO:0003677
Phac1g00418 296 SUPERFAMILY Homeodomain-like 136 203 IPR009057 -
Phac1g00418 296 ProSitePatterns 'Homeobox' domain signature. 170 193 IPR017970 GO:0000981|GO:0006355
Phac1g00418 296 ProSiteProfiles 'Homeobox' domain profile. 135 195 IPR001356 GO:0003677
Phac1g00418 296 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 12 268 - -
Phac1g00418 296 SMART HOX_1 137 199 IPR001356 GO:0003677
Phac1g00418 296 Pfam Homeobox associated leucine zipper 195 228 IPR003106 GO:0006355|GO:0043565
Phac1g00418 296 MobiDBLite consensus disorder prediction 29 98 - -
Phac1g00418 296 CDD homeodomain 138 196 IPR001356 GO:0003677
Phac1g00418 296 SMART halz 195 238 IPR003106 GO:0006355|GO:0043565
Phac1g00418 296 FunFam Homeobox-leucine zipper protein 18 123 200 - -
Phac1g00418 296 MobiDBLite consensus disorder prediction 79 98 - -
Phac1g00418 296 MobiDBLite consensus disorder prediction 29 49 - -
Phac1g00418 296 Coils Coil 201 231 - -
Phac1g00418 296 Gene3D - 130 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00418 Phac-Chr1 2907160 2911500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00418 1 296 Homeobox Transcription Factor Family AT4G37790 44.551 2.65e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac1g00418 Homeodomain 4.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00418 K09338 - gmx:100807072 440.269