Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00417 ATGGGCAGGGCTCCTTGCTGCGACAAAGCAAACGTGAAGAAAGGTCCATGGTCACCAGAAGAAGATGCTAAGCTCAAATCCTACATAGAAAAACATGGCACTGGTGGTAACTGGATTGCTTTGCCTCAAAAAATAGGCCTTAAGCGATGTGGCAAGAGTTGCCGTCTTAGGTGGCTAAACTATCTTCGCCCTAATCTCAGACACGGTGGTTTCTCCGAAGAAGAAGACAACATTATTTGCAGTCTCTACATCAGTATCGGAAGCAGGTGGTCGGTGATTGCAGCACAATTGCCAGGAAGAACTGATAATGACATAAAGAACTACTGGAACACGAGGCTGAAAAAGAAGCTTCTAGGGAAGCATCGAAGAGAGCCACGTAATAGAGGCAATTACAACAGTGTTAGGCAAGAAATTAGTGATGCTAATAGAAGGAGTAGTGATGGTGATTCTTCTTCCTTATCCATGGTTCAGGAAAACAGTAGCACCAGTCAACAACAACAACAACCATGTTGGCCACAGAACATTAACATGCCTGTGCTACCACTACCAGTAGTACCCTTGCCACACACAGACCAAGGCCCAGGTTTCAACGACCAAGATTCTATCAAGAAACTCCTCATCAAACTTGGAGGAAGATTTTCAGGTGATTATTACCAGCCTACCCTTGATGGGTTGAATCTTCAATTCTCATCAGAAGGGCAACAAGTTTACCAAGAGCAAGTTCATGTTGGTTCTTCTTCTTCTTCAGCCTGCATTGCCAACAACGAGTTACAATTTGCACAAACTGGTCAATACTCTGGAGTTGATGACTTGGTGCAAGGACAAGGAGGTAATTTCACTCCCTCATTTGAGGAAATGGTGCCTTCTTCAGATTATTCAGATGGGTTGGAGTTCTTGTACAATGAGGGCATGATCCATAAGATAGCTGACTCTACTACTACTACAACTACTTGCCACCAAAATACCACCACCACCACAAATTGGGGTGAAACCACCACTTCCATTTATCACCATCATTCACTTGCTTCCCATTTTCAAGGTCAAGGTGTGACACAAGAATGTGCTCTACAAGAGTTTAGCTACCCCGGGGCACAATAA 1098 0.4408 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEKHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNLRHGGFSEEEDNIICSLYISIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRREPRNRGNYNSVRQEISDANRRSSDGDSSSLSMVQENSSTSQQQQQPCWPQNINMPVLPLPVVPLPHTDQGPGFNDQDSIKKLLIKLGGRFSGDYYQPTLDGLNLQFSSEGQQVYQEQVHVGSSSSSACIANNELQFAQTGQYSGVDDLVQGQGGNFTPSFEEMVPSSDYSDGLEFLYNEGMIHKIADSTTTTTTCHQNTTTTTNWGETTTSIYHHHSLASHFQGQGVTQECALQEFSYPGAQ* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00417 365 MobiDBLite consensus disorder prediction 119 173 - -
Phac1g00417 365 FunFam Transcription factor MYB36 70 142 - -
Phac1g00417 365 PANTHER OS09G0431300 PROTEIN 1 310 - -
Phac1g00417 365 CDD SANT 71 113 IPR001005 -
Phac1g00417 365 FunFam Transcription factor RAX3 7 68 - -
Phac1g00417 365 Gene3D - 70 146 - -
Phac1g00417 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Phac1g00417 365 Gene3D - 7 68 - -
Phac1g00417 365 SMART sant 13 64 IPR001005 -
Phac1g00417 365 SMART sant 67 115 IPR001005 -
Phac1g00417 365 MobiDBLite consensus disorder prediction 131 173 - -
Phac1g00417 365 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phac1g00417 365 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Phac1g00417 365 CDD SANT 16 62 IPR001005 -
Phac1g00417 365 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac1g00417 365 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Phac1g00417 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Phac1g00417 365 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00417 Phac-Chr1 2867377 2869518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00417 1 208 MYB Transcription Factor Family AT3G49690 62.085 6.36e-85 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g00417 Myb_DNA-binding 1.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00417 K09422 - gmx:100800290 579.326