Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00402 ATGGATCTTGGGGTGGTGGGTTTGGAGGGGTTGGTGGGTTCAGACAGTAGTTGCGCCTTTGGTTCTTCTCTTGCTTCAGATCCTGAGACAAAACACAAGTGGTACGGATCTGGGGTGCTCAAGCAAGAGAGATCTGGCGCAGCAAGTGAAGATGAGTGGAGGACTTCAAAAGTGCCTAAAACTGATGACAACATGTCTGCTGCATCCAAAGCAATGCTCTTTCACCAGAGGAACTCTCTGCTGAGATCTAATGTCACGCTTTTCTCTGAGGGCCACAACCAACCACAAATGCTGAGCTTCTCTTCACCAAAATCAGAGCCTTTGCTGGTGGACAAGGCCTCCTTAAATGCCACATTGCCTTTTTCTTACCACCAATTGTCTAGTTACAGCAGAAATACAGGTTACAGTTCGGGAAGCATAAGCATGCATGGGGCTTTGTCTGGTGTGAGAGGGCCATTCACGCCTTCACAGTGGATGGAACTTGAACACCAAGCTTTGATCTACAAGTACATCACAGCAAACGTCCCTGTACCAACTCATCTTCTCATACCCATCAGAAAAGCACTCGATTCTGCTGCCTTCTGCAACTTTTCAACCGGACTCCTCAGACCCAACACATTGGGATGGGGAGGTTTCCATCTGGGATTCTCGAACAACACAGACCCTGAGCCAGGGAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTAGTTGATCAGAAGTATTGCGAGCGGCACATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTCACCACCACTACCACCACAACAACCACCACTACTCCTCCTAATGCTTCCTCAAACTCCATTGTGGTGCCCGGCAACAACAACAATAACAACACCTTTGCACACAACAATGTGCACCACCCTCTCCCATCTCATTCCTCTCCAGCCAACACCATCAACAGGATGTTTATGAGTAACAAAGAGAACAATAACAACGCTAGTGAGAGGATGCAGGATGGCCCTGCACTTCCCATGGTGCCTCCAACTCTTGAGCTGAAACCAAAGGACCCTTTCATGATTCATAAACACCAACTCCCATATGATGAATCATCCTCAAGGAACAACAATGAGTTTGGGCTTGTCACTTCTGATTCCTTGCTCAACCCTTCACAGAAGAGAAGCTTTGGTTCATCATCTTCACAAAAGGATGATTCTGAGTCCCAACAACAACATCCCCTCAGGCACTTCATTGACGACTCTCCCAAACCACAGTCTCATCATCACCATCATCGTTCTTCTGTGTGGCCTGAACTTGACAACATGCAGTCAGATAGGACTCAGTTATCAATCTCCATACCGATATCTTCCTCAGATTTCATGTCATTCGCTACCTCCTCACCCTCTAATGAGAAACTCACATTGTCACCACTAAGGCTTTCAAGGGAGTTAGACCCCATTCAAATGGGGTTGGGAGTGGGAAGTGGTGCTCCCAATGAATCAAACACTAGGCAAGCCAATTGGATTCCAATCACTTGGGAGAGTTCTATGGGTGGTCCTCTTGGTGAGGTTTTGAACCTGAGTAGTAGTAATAACAACAGCAATGGAAGTGATCACTGTGGCAAGAACACTTCTGCTCTCAACCTCATGAAAGATGGGTGGGACAATAGTCCTCCCCTAGGCTCATCTCCTAATGGGGTGTTGCAAAAAACAGCATTTGGATCACTTTCCAATAGCAGTGCTGGAAGCAGTCCAAGGGCAGACAACAACAACAACAAAGAAAGTGCCAGTGCCACCACACTGTGCAATGCCTTGTGA 1824 0.4781 MDLGVVGLEGLVGSDSSCAFGSSLASDPETKHKWYGSGVLKQERSGAASEDEWRTSKVPKTDDNMSAASKAMLFHQRNSLLRSNVTLFSEGHNQPQMLSFSSPKSEPLLVDKASLNATLPFSYHQLSSYSRNTGYSSGSISMHGALSGVRGPFTPSQWMELEHQALIYKYITANVPVPTHLLIPIRKALDSAAFCNFSTGLLRPNTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHALTTTTTTTTTTTPPNASSNSIVVPGNNNNNNTFAHNNVHHPLPSHSSPANTINRMFMSNKENNNNASERMQDGPALPMVPPTLELKPKDPFMIHKHQLPYDESSSRNNNEFGLVTSDSLLNPSQKRSFGSSSSQKDDSESQQQHPLRHFIDDSPKPQSHHHHHRSSVWPELDNMQSDRTQLSISIPISSSDFMSFATSSPSNEKLTLSPLRLSRELDPIQMGLGVGSGAPNESNTRQANWIPITWESSMGGPLGEVLNLSSSNNNSNGSDHCGKNTSALNLMKDGWDNSPPLGSSPNGVLQKTAFGSLSNSSAGSSPRADNNNNKESASATTLCNAL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00402 607 MobiDBLite consensus disorder prediction 526 546 - -
Phac1g00402 607 SMART QLQ_2 151 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac1g00402 607 MobiDBLite consensus disorder prediction 410 438 - -
Phac1g00402 607 MobiDBLite consensus disorder prediction 368 441 - -
Phac1g00402 607 MobiDBLite consensus disorder prediction 250 321 - -
Phac1g00402 607 Pfam WRC 222 264 IPR014977 -
Phac1g00402 607 ProSiteProfiles QLQ domain profile. 152 187 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phac1g00402 607 MobiDBLite consensus disorder prediction 560 607 - -
Phac1g00402 607 MobiDBLite consensus disorder prediction 526 607 - -
Phac1g00402 607 MobiDBLite consensus disorder prediction 266 321 - -
Phac1g00402 607 ProSiteProfiles WRC domain profile. 221 265 IPR014977 -
Phac1g00402 607 PANTHER GROWTH-REGULATING FACTOR 5 90 468 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phac1g00402 607 MobiDBLite consensus disorder prediction 333 356 - -
Phac1g00402 607 MobiDBLite consensus disorder prediction 372 409 - -
Phac1g00402 607 Pfam QLQ 152 186 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00402 Phac-Chr1 2695001 2699740 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00402 41 595 GRF Transcription Factor Family AT2G22840 43.304 2.48e-110 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phac1g00402 WRC 5.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00402 - - gmx:100818860 961.444