Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00388 ATGTTCTTCCACCAAGAACCCGAACCGGTTCACTCCTCCTGTTTCCCGGTTCTCCAAACCATGTTCACGCCCGCCGAAATAGAGGAGCTATTCTCCCTCGTTAACGAACCGCCCAGCCCGGAGTCCGGTTCGCAGGGCTCGAACCGCGCGGTCCGGTCCCCGCACGAGAGAAAGCTTCGGCGAATGCAGTCGAACCGGGAGTCAGCCCGGCGGTCCCGCTGGAGAAAGAAGCGGCATTTAGAGAACCTCACGAACCAACAGAACCGGTTCAGAATGGAAAACCGAGAATTGAAAAACCGGTTATTCTTAACCATGCACCAGAATCTTCTTCTCTCCGTGGAGAATGAACGTCTTAGATCCGAATCCTTGACCCTTATGGCTACACTCTCAAATCTTTATCAAATTCTAGGCATTTCACAATAG 423 0.5248 MFFHQEPEPVHSSCFPVLQTMFTPAEIEELFSLVNEPPSPESGSQGSNRAVRSPHERKLRRMQSNRESARRSRWRKKRHLENLTNQQNRFRMENRELKNRLFLTMHQNLLLSVENERLRSESLTLMATLSNLYQILGISQ* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00388 140 FunFam BZIP transcription factor 55 107 - -
Phac1g00388 140 SMART brlzneu 53 117 IPR004827 GO:0003700|GO:0006355
Phac1g00388 140 Pfam bZIP transcription factor 57 101 IPR004827 GO:0003700|GO:0006355
Phac1g00388 140 CDD bZIP_plant_GBF1 58 107 IPR045314 GO:0003700|GO:0006355
Phac1g00388 140 Gene3D - 55 108 - -
Phac1g00388 140 PANTHER BZIP TRANSCRIPTION FACTOR 44 40 137 - -
Phac1g00388 140 Coils Coil 80 100 - -
Phac1g00388 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 60 75 IPR004827 GO:0003700|GO:0006355
Phac1g00388 140 MobiDBLite consensus disorder prediction 51 69 - -
Phac1g00388 140 SUPERFAMILY Leucine zipper domain 57 109 IPR046347 GO:0003700|GO:0006355
Phac1g00388 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 55 101 IPR004827 GO:0003700|GO:0006355
Phac1g00388 140 MobiDBLite consensus disorder prediction 33 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00388 Phac-Chr1 2567619 2568308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00388 3 140 bZIP Transcription Factor Family AT3G49760 37.838 1.22e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phac1g00388 bZIP_1 2.3e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00388 - - gmx:102668006 216.468