Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00367 ATGTTGTGTGCTTGTTCCGGAGAGCAATTCAAATTTGAAGAGACGCCACAGTCACCTGAGTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGTCTTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGATGAGACGCAAGTGGAAGAAGTTGAATCTACTTTAAAAGAAACTCTCTCATTAAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTTGAATTCCAAAGAGGGAACTTTGATGCTGCCCTTCTAGTTTTTGAAGGGATAGACATAAGGGCTTTGGCCCCAAGGATGATCAAGGCTATAGCTGAAAGAACTAAGCAAAGAAAACCACGGTCAAAGGTGGATAATGTGCTTCCAAATGTAATGTCAATGCATTCAGTAAGCCTGCTTCTAGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGAAGATACACCGAGGCTGCAAAAGAGTGCAGAATTATTGTAGATACAGTTGAATCTGCTCTCCCTAAAGGAATGCCTGAGGGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCTACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTTCTAGACGAAGCTGTCACTGCTTATCGGCGGGCTCTAACCAAGCCGTGGAATTTGGAGCCGTGGAGATTGGCCTGTGTACAAAAAGAGTTGGCTACCACACTACTCTATGGTGGTGTTGAAGTAAACCTACCCTCTCAGTTGCAAGTGAATGGTCTAACTACACCTATGAGTGGCACTGAAGAAGCCATACTTTTGCTGTTAATACTCTCAGGAAAGATGGCACTTCAGGAAATAGACTGGGACCCTGAAATAATGGATCATCTTACATTTTCACTTTCAATTACTGGAATGTTTGAATCATTGGCAGATAACTTAGAGAAGATCCTTCCAGGTCTTTATGATAGGGCAGAGAGGTGGTATTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAGAATGAAGTAGCCTTGAACCTTTTGAGGAAAGCTTGTGGCAGTTCTGAAGCCAAGCACAGACCCTATTTTCCTTCATTTTTGTTTGGTGCAAAGCTGTGTTCTCTATGTCCAAAACATGCTCATGAAGGCATTAAGTTTTCACAGGAAGTTATTGATCTAGCCAAGCATCAAAATGAGCATTTTCTGGGTGAGGGCCAAAAATTTCTGGGCACTTGCCAAGGGGCTGCTGCTAGAATATCTGTACTAGATTCTGAAAGAATTATATTTCAAAGACAGTCTTTGTACTTTCTAAACGATGCTGTTGCTCTAAATGGAAATAATGATCCAGAAGTGATATTCAGCCTTGGATTGGAAAATGCAATCCAAAGAAATCTAAATGCAGCATATGACAATCTAATGATATACTCTGACATGATGGCTGGCAGCTCAAAAAGAGGTTGGCAGTTGTTAGCACTCATAGTATCAGCACAGCAGCGGTTTAAGGATGCGGAAACTATAGTTGATTTTGCTTTAGATGAGGCTTGTAGTATAGACCAGTTAGAACTACTGAGACTGAAAGCTATACTTCAAATTACTCAGCAGCAACCCAAGCAAGCAATAGAGACCTACAGAATCTTGCTAGCAGTAATTGAATCACAAAAGGACCATTGGCTTCAGGCTAAGGCATTCAGGCATGAGGCATTAACACAACAGAAGTTGGAAATGGAAGCCTGGCAAGATTTGGCTACCATTTATGTAGATCTTTGCTCCTTTCTAGATGCAAAAGCTTGTGTTGACAAGGCCCAGTTGATAGATTTTTTTTCTCCTAGAAGTTGGCATATTACTGGGTTGTTGTTTGAATCTCGAACATTGCATAAGGAGGCCTTAGCTTCCTTCTCAGTCTCATTGTCAATAGAACCGGATTACATTCCCAGTATCATTTCAGCTGCAAAATTGTTGCTTAAACTTGGCATGCAGCCACTCCCAATCGCAAGAAGCTTTTTAATGAATGCTTTGAGATTAGATCCTACAAACCATGATGCATGGTTTAACCTTGGACTAGTTTCAAAAATGGAAGGTTCATTGCAACAAGCAGCAGATTGCTTTCAAGCCGCATATGAGCTGAAGCTTTCAGCTCCAGTGCAAAAATTTGAGTGA 2133 0.4149 MLCACSGEQFKFEETPQSPESLATRDFSASGLSSRTGDWESKFDETQVEEVESTLKETLSLNYEEARALLGRLEFQRGNFDAALLVFEGIDIRALAPRMIKAIAERTKQRKPRSKVDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYTEAAKECRIIVDTVESALPKGMPEGIGEDCKLQEMFYKALELLPNLWIKAGFLDEAVTAYRRALTKPWNLEPWRLACVQKELATTLLYGGVEVNLPSQLQVNGLTTPMSGTEEAILLLLILSGKMALQEIDWDPEIMDHLTFSLSITGMFESLADNLEKILPGLYDRAERWYFLALCYSAAGQNEVALNLLRKACGSSEAKHRPYFPSFLFGAKLCSLCPKHAHEGIKFSQEVIDLAKHQNEHFLGEGQKFLGTCQGAAARISVLDSERIIFQRQSLYFLNDAVALNGNNDPEVIFSLGLENAIQRNLNAAYDNLMIYSDMMAGSSKRGWQLLALIVSAQQRFKDAETIVDFALDEACSIDQLELLRLKAILQITQQQPKQAIETYRILLAVIESQKDHWLQAKAFRHEALTQQKLEMEAWQDLATIYVDLCSFLDAKACVDKAQLIDFFSPRSWHITGLLFESRTLHKEALASFSVSLSIEPDYIPSIISAAKLLLKLGMQPLPIARSFLMNALRLDPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQKFE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00367 710 SMART tpr_5 671 704 IPR019734 GO:0005515
Phac1g00367 710 SMART tpr_5 512 545 IPR019734 GO:0005515
Phac1g00367 710 SMART tpr_5 317 350 IPR019734 GO:0005515
Phac1g00367 710 SMART tpr_5 601 634 IPR019734 GO:0005515
Phac1g00367 710 SMART tpr_5 567 600 IPR019734 GO:0005515
Phac1g00367 710 SUPERFAMILY TPR-like 425 596 IPR011990 GO:0005515
Phac1g00367 710 SUPERFAMILY TPR-like 555 701 IPR011990 GO:0005515
Phac1g00367 710 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Phac1g00367 710 SUPERFAMILY TPR-like 65 344 IPR011990 GO:0005515
Phac1g00367 710 PANTHER PROTEIN NPG1 1 710 IPR043376 -
Phac1g00367 710 Gene3D Tetratricopeptide repeat domain 260 538 IPR011990 GO:0005515
Phac1g00367 710 Gene3D Tetratricopeptide repeat domain 33 244 IPR011990 GO:0005515
Phac1g00367 710 Gene3D Tetratricopeptide repeat domain 539 705 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00367 Phac-Chr1 2425545 2429979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00367 1 709 Calmodulin-binding Proteins AT1G27460 58.485 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00367 K21843 - gmx:100799086 1266.52