Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00360 ATGGAACCTGTTGGAGCCTTCCCTGATGGAGAATGGGATTGCTTTCGGGGAATGTTTGCCAGTGAGGATCATTTCACATCGGAGTTTCCTCTTCTGCTTGGTGGAGGCGATGAACTGAACATTGTGACAGAGCAAGCCAATTTTTGTGGTGCTCCTGAAGCTGGTGAAAATGAGCTGATGTTTTATTCTTTAGATGCTCACAACTCAAATTCTTCACAGTATATTTCTCAGGAAAGTAGCTATAGTAATAGTAGCAATTGTAGTGGTGATGACACTGTCTTCATTGCCAATCCGGGTAGCTCAAACTATTATTTTAGTTACCCTGATCATATGTCACCAAATAATGCATGTGTATATTCCTTGGATGAGAAACATTTTGCCCCTTTTGCTCCATCGCTTCCCAACATTGCAACGGAAGAGAATGTGAAGCTGTATGAAGATTTGGCAAGTGACAGATTGGAGAATTCTGAGTGCAATCAAATGGAACCTATTGTTTTTCCCACCAAGAGGAAGATTGATGTGCTTGCTGAAGGTAAAATCAACAACAGATCAGAGAATCACAAGAAAAGAGCTCGTGTTTCAAAAGATGTGCAAGGATGTATGAAGAACAAATGGTCCAAGAAGAATCAGAAAAATGACAGCAATAGGGAAGATGCAGAAGAGACTAATGCAGGATCAGATGGACAAAGCTCAAGTAGTAACATGTCAGAGGATGATAACAAGGAAAATGTTGGAGGAGCTACTTCAGAATCTAAATCTGTTCTCAACTCAAATGGAAAAACAAGAGCAAGTAGGGGATCAGCAACAGATCCCCAGAGCCTATATGCAAGGAAAAGAAGAGAGAGAATAAATGAACGATTAAGAATCCTACAGAATCTTGTCCCTAATGGAACCAAGGTTGATATAAGTACAATGCTTGAAGAGGCAGTCAATTATGTGAAATTTTTGCAGCTACAAATCAAGCTTTTAAGCTCAGATGATCTATGGATGTATGCTCCACTTGCTTATAATGGGCTTGACATTGGACTCAATCTGAACATGAAGTCCCTACCACTCTGA 1059 0.4023 MEPVGAFPDGEWDCFRGMFASEDHFTSEFPLLLGGGDELNIVTEQANFCGAPEAGENELMFYSLDAHNSNSSQYISQESSYSNSSNCSGDDTVFIANPGSSNYYFSYPDHMSPNNACVYSLDEKHFAPFAPSLPNIATEENVKLYEDLASDRLENSECNQMEPIVFPTKRKIDVLAEGKINNRSENHKKRARVSKDVQGCMKNKWSKKNQKNDSNREDAEETNAGSDGQSSSSNMSEDDNKENVGGATSESKSVLNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGLNLNMKSLPL* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00360 352 MobiDBLite consensus disorder prediction 224 271 - -
Phac1g00360 352 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 267 316 IPR011598 GO:0046983
Phac1g00360 352 MobiDBLite consensus disorder prediction 180 279 - -
Phac1g00360 352 SMART finulus 273 322 IPR011598 GO:0046983
Phac1g00360 352 Gene3D - 266 324 IPR036638 GO:0046983
Phac1g00360 352 MobiDBLite consensus disorder prediction 180 197 - -
Phac1g00360 352 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 85 339 - -
Phac1g00360 352 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 331 IPR036638 GO:0046983
Phac1g00360 352 Pfam Helix-loop-helix DNA-binding domain 277 317 IPR011598 GO:0046983
Phac1g00360 352 CDD bHLH_AtIND_like 268 330 - -
Phac1g00360 352 FunFam Basic helix-loop-helix transcription factor 268 325 - -
Phac1g00360 352 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00360 Phac-Chr1 2329077 2331203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00360 245 343 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 84.615 1.50e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac1g00360 HLH 1.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00360 - - gmx:100797500 504.982