Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00344 ATGGCGTCTTCCTCAGAGAACAGAAGCAACACGACGCGTCCCCAGCGCGAGGCGAAGAAGAGAGCCGCAGCTGCCATATGCCAACAGCTCGGAAATGCGAAGAAGAAGCGCGTCGTTTTGGGAGACCTCACGAATGTTCCAAACTCCGTTGCCGTTTCGGATATTCCGAAACGGAAAAGAGTTAAACTGAAGAAAATCGATGAAAGAAGCGACTCTCAACTCTGTGGGCCATACGGTTCTGATATATACGAGTACCTTTGCGGATTGGAGGTTGTTCCTAATTTGAGACCGATGCCGGATTATGTTCAGAAGGTTCAGAACGACGTGGATGATAACATGCGCGGTCTTCTGGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATGAACTGGTTTCAGATACGTTGTACTTTTGTGTGGCTTATATAGATAGGTTTTTATCGTTGAATGTATTGTCCAGAGAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTCATTGCTTCGAAATATGAAGAGGTTAAGCCACCCGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATGTATTGATGGCTTTGAAGTTTGAATTGGGTGCTCCTACAGTGAGGACGTTCTTGAGGAGATTCTGTGGAGTTGGTCAAGTGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCAGAGCTCAGTTTGTTGGATTATTACTGTGTAAAGTTCTTACCATCTTTGGTGGCAGCATCTGTTGTATTCTTAGCAAGATTTATGTTAAGCACAAGGACACATCCTTGGAATTCGGCCCTCCACCAACTCACTAAATATAAACCCGCTGACTTGAAGGAATGTATTCTAAACATACATGACTTGTACCTCAGAAGGAGGGGGCCTTCTTTGGAAGCTGTGAGAGAGAAGTACAAACAGCATAAGCACGCTATAGCAGTGGGGTTGGTGAAACTGAGGCTCCCACTATCCCGAGGTGGTTGTGTTCTAGATAAAGGTTTGGCCATGGTGTCCACAAATTTGTTACTCGTACTGGTTGATTCCCTCAATTGCACAACCAGTAAAGATTCCATTATAACAAATGCTGTATGTTAA 1143 0.4479 MASSSENRSNTTRPQREAKKRAAAAICQQLGNAKKKRVVLGDLTNVPNSVAVSDIPKRKRVKLKKIDERSDSQLCGPYGSDIYEYLCGLEVVPNLRPMPDYVQKVQNDVDDNMRGLLVDWLVEVAEEYELVSDTLYFCVAYIDRFLSLNVLSRERLQLLGVAAMLIASKYEEVKPPEVEDFCYITDNTYSKEEVVNMEADVLMALKFELGAPTVRTFLRRFCGVGQVGVDTSDLQFEFLSCYLAELSLLDYYCVKFLPSLVAASVVFLARFMLSTRTHPWNSALHQLTKYKPADLKECILNIHDLYLRRRGPSLEAVREKYKQHKHAIAVGLVKLRLPLSRGGCVLDKGLAMVSTNLLLVLVDSLNCTTSKDSIITNAVC* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00344 380 Gene3D - 97 210 - -
Phac1g00344 380 SMART cyclin_7 119 203 IPR013763 -
Phac1g00344 380 SMART cyclin_7 216 304 IPR013763 -
Phac1g00344 380 Pfam Cyclin, C-terminal domain 212 327 IPR004367 -
Phac1g00344 380 MobiDBLite consensus disorder prediction 1 22 - -
Phac1g00344 380 CDD CYCLIN_AtCycA-like_rpt2 212 326 - -
Phac1g00344 380 SUPERFAMILY Cyclin-like 71 209 IPR036915 -
Phac1g00344 380 FunFam Cyclin A1 199 330 - -
Phac1g00344 380 SMART Cyclin_C_2 212 334 IPR004367 -
Phac1g00344 380 Gene3D - 81 326 - -
Phac1g00344 380 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
Phac1g00344 380 SUPERFAMILY Cyclin-like 212 327 IPR036915 -
Phac1g00344 380 PIRSF Cyclin_A_B_D_E 1 339 IPR046965 GO:0016538|GO:0044772
Phac1g00344 380 PANTHER CYCLINS 37 326 IPR039361 -
Phac1g00344 380 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Phac1g00344 380 FunFam Mitotic cyclin 6 97 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00344 Phac-Chr1 2211184 2215103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00344 5 351 Core Cell Cycle Gene Families AT1G47230 53.619 8.30e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00344 K06627 - gmx:100791691 505.368