Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00343 ATGGCGTCTTCCTCAGAGAACAGAAGCAACACGACGCGTCCCCAGCGCGAGGCGAAGAAGAGAGCCGCAGCTGCCATATGCCAACAGCTCGGAAATGCGAAGAAGAAGCGCGTCGTTTTGGGAGACCTCACGAATGTTCCAAACTCCGTTGCCGTTTCGGATATTCCGAAACGGAAAAGAGTTAAACTGAAGAAAATCGATGAAAGAAGCGACTCTCAACTCTGTGGGCCATACGGTTCTGATATATACGAGTACCTTTGCGGATTGGAGGTTGTTCCTAATTTGAGACCGATGCCGGATTATGTTCAGAAGGTTCAGAACGACGTGGATGATAACATGCGCGGTCTTCTGGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATGAACTGGTTTCAGATACGTTGTACTTTTGTGTGGCTTATATAGATAGGTTTTTATCGTTGAATGTATTGTCCAGAGAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTCATTGCTTCGAAATATGAAGAGGTTAAGCCACCCGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATGTATTGATGGCTTTGAAGTTTGAATTGGGTGCTCCTACAGTGAGGACGTTCTTGAGGAGATTCTGTGGAGTTGGTCAAGTGGGTGTTGATACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCAGAGCTCAGTTTGTTGGATTATTACTGTGTAAAGTTCTTACCATCTTTGGTGGCAGCATCTGTTGTATTCTTAGCAAGATTTATGTTAAGCACAAGGACACATCCTTGGAATTCGGCCCTCCACCAACTCACTAAATATAAACCCGCTGACTTGAAGGAATGTATTCTAAACATACATGACTTGTACCTCAGAAGGAGGGGGCCTTCTTTGGAAGCTGTGAGAGAGAAGTACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCGGCGATACCCCTTTCTTTTTTTGAATTTTCAAGGGTATCTTAG 1050 0.4476 MASSSENRSNTTRPQREAKKRAAAAICQQLGNAKKKRVVLGDLTNVPNSVAVSDIPKRKRVKLKKIDERSDSQLCGPYGSDIYEYLCGLEVVPNLRPMPDYVQKVQNDVDDNMRGLLVDWLVEVAEEYELVSDTLYFCVAYIDRFLSLNVLSRERLQLLGVAAMLIASKYEEVKPPEVEDFCYITDNTYSKEEVVNMEADVLMALKFELGAPTVRTFLRRFCGVGQVGVDTSDLQFEFLSCYLAELSLLDYYCVKFLPSLVAASVVFLARFMLSTRTHPWNSALHQLTKYKPADLKECILNIHDLYLRRRGPSLEAVREKYKQHKFKCVATTPSPPAIPLSFFEFSRVS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00343 349 SMART cyclin_7 119 203 IPR013763 -
Phac1g00343 349 SMART cyclin_7 216 304 IPR013763 -
Phac1g00343 349 MobiDBLite consensus disorder prediction 1 22 - -
Phac1g00343 349 CDD CYCLIN_AtCycA-like_rpt2 212 326 - -
Phac1g00343 349 SMART Cyclin_C_2 212 335 IPR004367 -
Phac1g00343 349 Pfam Cyclin, C-terminal domain 212 334 IPR004367 -
Phac1g00343 349 PANTHER CYCLINS 37 329 IPR039361 -
Phac1g00343 349 Gene3D - 81 331 - -
Phac1g00343 349 Gene3D - 97 210 - -
Phac1g00343 349 SUPERFAMILY Cyclin-like 71 209 IPR036915 -
Phac1g00343 349 FunFam Mitotic cyclin 6 97 197 - -
Phac1g00343 349 PIRSF Cyclin_A_B_D_E 1 341 IPR046965 GO:0016538|GO:0044772
Phac1g00343 349 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
Phac1g00343 349 FunFam Cyclin A1 199 331 - -
Phac1g00343 349 SUPERFAMILY Cyclin-like 212 336 IPR036915 -
Phac1g00343 349 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00343 Phac-Chr1 2211184 2215103 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00343 5 344 Core Cell Cycle Gene Families AT1G47230 56.164 1.34e-142 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00343 K06627 - gmx:100801988 543.502