Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00342 ATGGCGTCTTCCTCAGAGAACAGAAGCAACACGACGCGTCCCCAGCGCGAGGCGAAGAAGAGAGCCGCAGCTGCCATATGCCAACAGCTCGGAAATGCGAAGAAGAAGCGCGTCGTTTTGGGAGACCTCACGAATGTTCCAAACTCCGTTGCCGTTTCGGATATTCCGAAACGGAAAAGAGTTAAACTGAAGAAAATCGATGAAAGAAGCGACTCTCAACTCTGTGGGCCATACGGTTCTGATATATACGAGTACCTTTGCGGATTGGAGGTTGTTCCTAATTTGAGACCGATGCCGGATTATGTTCAGAAGGTTCAGAACGACGTGGATGATAACATGCGCGGTCTTCTGGTGGATTGGTTGGTTGAGGTTGCAGAAGAGTATGAACTGGTTTCAGATACGTTGTACTTTTGTGTGGCTTATATAGATAGGTTTTTATCGTTGAATGTATTGTCCAGAGAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTCATTGCTTCGAAATATGAAGAGGTTAAGCCACCCGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATGTATTGATGGCTTTGAAGTTTGAATTGGGTGCTCCTACAGTGAGGACGTTCTTGAGGAGATTCTGTGGAGTTGGTCAAGTGGGTGTTGATCTTATCCCACTATGCAGACTTCTGATCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCAGAGCTCAGTTTGTTGGATTATTACTGTGTAA 780 0.4577 MASSSENRSNTTRPQREAKKRAAAAICQQLGNAKKKRVVLGDLTNVPNSVAVSDIPKRKRVKLKKIDERSDSQLCGPYGSDIYEYLCGLEVVPNLRPMPDYVQKVQNDVDDNMRGLLVDWLVEVAEEYELVSDTLYFCVAYIDRFLSLNVLSRERLQLLGVAAMLIASKYEEVKPPEVEDFCYITDNTYSKEEVVNMEADVLMALKFELGAPTVRTFLRRFCGVGQVGVDLIPLCRLLISSLSSLAATLQSSVCWIITV* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00342 259 Gene3D - 97 210 - -
Phac1g00342 259 SUPERFAMILY Cyclin-like 71 209 IPR036915 -
Phac1g00342 259 Gene3D - 81 238 - -
Phac1g00342 259 PANTHER CYCLINS 37 247 IPR039361 -
Phac1g00342 259 MobiDBLite consensus disorder prediction 1 22 - -
Phac1g00342 259 SMART cyclin_7 119 203 IPR013763 -
Phac1g00342 259 PIRSF Cyclin_A_B_D_E 1 238 IPR046965 GO:0016538|GO:0044772
Phac1g00342 259 Pfam Cyclin, N-terminal domain 81 209 IPR006671 -
Phac1g00342 259 ProSitePatterns Cyclins signature. 114 145 IPR006671 -
Phac1g00342 259 FunFam G2/mitotic-specific cyclin 97 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00342 Phac-Chr1 2211184 2215103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00342 1 245 Core Cell Cycle Gene Families AT5G43080 55.078 9.78e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00342 K06627 - gmx:100791691 329.717