Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00329 ATGAAGGTGCATCAGTTGGCACGTGGATTCTGGGAGCATGAACCCTCCCTCACACTTGGGTGCAAACGCTTACGCCCCCTTGCCCCCAAGCTTTCCAACACCAACTCCACTACCTCTATCACTTCACCTCCTGTCACAACTTTCGACCTCAAGAGCTTCATCAAACCAGAAAGTGCCTCCACAAAACTTGGATCCTGTGACCACAATAAGAGAGACCCTACTTCACCTCAGGGCCAGGTGGAAACGCATATTCCAGGAGGGACACGGTGGAATCCGACTCAGGAACAGATAGGGATACTGGAGATGCTGTATAGAGGAGGGATGCGAACACCGAATGCTCAACAAATAGAGCACATCACAGTCCAACTTAGCAAGTACGGCAAGATCGAAGGGAAGAACGTGTTCTATTGGTTCCAAAACCACAAGGCACGCGAGAGACAAAAGCAGAAGCGTAACAACCTAGGCCTTGCTCATAGTCCTCGTACTCCCACCACACTACTGTCATCTTCCTTTAGTTGTAGTGTAATAACCTCTTTCGACACCACAAAACGGGTATGTGTATATATGTCTCAGCTACTACAAGCTCGTCAAAATTGTATATATATAATGAGACAATTCAGAAACATCTCAATCCTTATACAAACATATTAG 651 0.4654 MKVHQLARGFWEHEPSLTLGCKRLRPLAPKLSNTNSTTSITSPPVTTFDLKSFIKPESASTKLGSCDHNKRDPTSPQGQVETHIPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEHITVQLSKYGKIEGKNVFYWFQNHKARERQKQKRNNLGLAHSPRTPTTLLSSSFSCSVITSFDTTKRVCVYMSQLLQARQNCIYIMRQFRNISILIQTY* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00329 216 SMART HOX_1 85 152 IPR001356 GO:0003677
Phac1g00329 216 MobiDBLite consensus disorder prediction 59 91 - -
Phac1g00329 216 Gene3D - 87 154 - -
Phac1g00329 216 MobiDBLite consensus disorder prediction 70 91 - -
Phac1g00329 216 ProSiteProfiles 'Homeobox' domain profile. 93 148 IPR001356 GO:0003677
Phac1g00329 216 Pfam Homeodomain 88 147 IPR001356 GO:0003677
Phac1g00329 216 CDD homeodomain 88 149 IPR001356 GO:0003677
Phac1g00329 216 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 185 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Phac1g00329 216 SUPERFAMILY Homeodomain-like 87 152 IPR009057 -
Phac1g00329 216 FunFam WUSCHEL-related homeobox 4 87 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00329 Phac-Chr1 2130412 2132785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00329 1 154 Wox Gene Family AT1G46480 67.485 2.52e-66 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phac1g00329 Homeodomain 2.2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00329 - - gmx:100500674 289.656