Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00328 ATGGAATATAGGGATCACTGTTGCTCCAACGATTCAACCATCACCAACAGAAGAAGAAGAAGCAGAAGCCCAACAACAACCTTGGAGAAATCGAAGAAGCAACACCACGAGAAACCCATGAAGCCGTACCGAGGAATACGGATGAGGAAGTGGGGAAAGTGGGTGGCGGAGATCAGAGAACCGAACAAGAGGTCCAGGATTTGGTTGGGTTCTTACACGACGCCCGTCGCCGCCGCACGCGCCTACGACACCGCCGTTTTCTACCTCCGAGGTCCCTCCGCGCGCCTCAATTTCCCCGAACTTCTGTTCCAGGACGAGGTCGACGGCGCTAACGATGACGATTCCGTGAACATGTCAGCTGATTCCATCCGCCGCAAAGCCACGCAAGTCGGCGCCAGAGTCGACGCGCTCCAAACTGCGCTTCACCATCACGCGCCTTCGCACAACCCGACCCAAATCTCTCTCAAACCCGACTTGAACGAGTTCCCGAAACTCGAAGACCTTCAAGATTGA 513 0.5517 MEYRDHCCSNDSTITNRRRRSRSPTTTLEKSKKQHHEKPMKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPELLFQDEVDGANDDDSVNMSADSIRRKATQVGARVDALQTALHHHAPSHNPTQISLKPDLNEFPKLEDLQD* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00328 170 Gene3D AP2/ERF domain 42 100 IPR036955 GO:0003700|GO:0006355
Phac1g00328 170 PRINTS Ethylene responsive element binding protein signature 43 54 IPR001471 GO:0003700|GO:0006355
Phac1g00328 170 PRINTS Ethylene responsive element binding protein signature 81 101 IPR001471 GO:0003700|GO:0006355
Phac1g00328 170 ProSiteProfiles AP2/ERF domain profile. 42 99 IPR001471 GO:0003700|GO:0006355
Phac1g00328 170 Pfam AP2 domain 43 91 IPR001471 GO:0003700|GO:0006355
Phac1g00328 170 MobiDBLite consensus disorder prediction 1 36 - -
Phac1g00328 170 FunFam Ethylene-responsive transcription factor 2 41 100 - -
Phac1g00328 170 SUPERFAMILY DNA-binding domain 42 100 IPR016177 GO:0003677
Phac1g00328 170 CDD AP2 43 101 IPR001471 GO:0003700|GO:0006355
Phac1g00328 170 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 25 168 - -
Phac1g00328 170 SMART rav1_2 42 105 IPR001471 GO:0003700|GO:0006355
Phac1g00328 170 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00328 Phac-Chr1 2109736 2111213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00328 41 144 AP2-EREBP Transcription Factor Family AT5G67190 70.370 1.03e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac1g00328 AP2 2.9e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00328 K09286 - gmx:547642 246.899