Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00326 ATGAACAATTCGATCATTCTCCACAACGCAAACGCAATCCACTTCAAATTCCACTCTGCATTATCACAAACACAACGAAGGCACCTTCCTTGGAACAAACACATAACTCAGCGTTACCCACGCATCCAATGCTGCTGCGTGGAAATCGACATGGTGAAGAACTCCCAAGGCATTTACGCCCCCAAAAGCGACAAGGTCGTCGTTCTCTGGGACCTCGACAACAAGCCCCCTCGCGGCCCCCCCTACGACGCCGCCGTTTCGCTCAAAACTCTCGCCGCCCGCTTCGGCGAGGTAACTGACTTCTCCGCCTACGCCAACCGCCACGCCTTCGTCCACCTTCCCCAGTGGGTCCTACAGGAACGCCGCGAACGGAGAAGCCTCGACATCCTCGAACGAAAGGGTGTGGTCACGCCCTCGGAGCCCTACACGTGCGGGGTGTGTGGACGCAAGTGCAAGACCCACATGGACCTGAAGAAGCACTTCAAGCAGCTGCACCAGCGCGAGCGGGAGAAGAAGCTGAACCGGTTGAAGTCGCTGAAGGGGAAGAAGAAACGGGACCGTTTCAAGGAACGGTTTTTGCGCGGGAATCATAAGTATAATGAGGCGGCGAGGACGCTGCTGGTGCCGAAGGTGGGGTACGGGCTGGCGGCGGAGCTTCGGCGGGCGGGGGTGTTTGTTAAGACGGTGCAGGACAAGCCGCAGGCGGCGGACTGGGCGTTGAAGAGGCAGATGGTGCATTCGATGAGTAGAGGGATTGATTGGCTGTTTTTGGTTTCGGATGATTCGGATTTTTCGGAGATGTTGAGGAGGGCGAGAGAGGCGGATTTGGGGACTGTGGTGGTGGGGGATTGGGATAGGGCTTTGGGGAGGCATGCGGATTTGTGGGTGCCTTGGAGTGCCGTTGAGAATGGGGAAGTAGATTTAGTGCCCAAGAGGAAGAAGAGAACAGAACATGGTTTTCAAGATGATAATGGCCATGATCGTCATGATTGGGGTGTTTTGAATGAGGATGAGGAACTGGGGCAAGAGTTTATGTTGCATAGTGAGGACGAGGATGAAGATGTGGAGAATTATTATTATGATGATGATGAAGAAGAGGAAGAGGAAGAGGAAGATGGGTTGTATATTTTTTGA 1134 0.5406 MNNSIILHNANAIHFKFHSALSQTQRRHLPWNKHITQRYPRIQCCCVEIDMVKNSQGIYAPKSDKVVVLWDLDNKPPRGPPYDAAVSLKTLAARFGEVTDFSAYANRHAFVHLPQWVLQERRERRSLDILERKGVVTPSEPYTCGVCGRKCKTHMDLKKHFKQLHQREREKKLNRLKSLKGKKKRDRFKERFLRGNHKYNEAARTLLVPKVGYGLAAELRRAGVFVKTVQDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWDRALGRHADLWVPWSAVENGEVDLVPKRKKRTEHGFQDDNGHDRHDWGVLNEDEELGQEFMLHSEDEDEDVENYYYDDDEEEEEEEEDGLYIF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00326 377 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Phac1g00326 377 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 39 370 - -
Phac1g00326 377 Gene3D - 59 300 - -
Phac1g00326 377 Coils Coil 162 182 - -
Phac1g00326 377 CDD PIN_LabA-like 152 283 - -
Phac1g00326 377 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00326 Phac-Chr1 2091734 2093684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00326 41 356 C2H2 Transcription Factor Family AT5G52010 66.049 1.10e-152 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac1g00326 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00326 - - pvu:PHAVU_001G023900g 706.827