Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00311 ATGTCTCACCATTACCCTAAGCTCCTTCTAGACACCCTACACTGCTTAGAAGACCACATTCACTGGGAGGAAGAAAAACAAAGAGAAGAAGATGATGATTACATCAGCACCACACCAGAACCAAACCTCTCCGATGTGGTACTCTTCGAACAAGACCTCTTCTGGGACACCAACGAGCTATCTTCTCTTCTCGCCAAAGAGAACCTTAACAACCCTTCCATCTCTCTCCTAAACAACCCTTCTTTGGCTTCTTCTCGCGGAGAAGCTGTGGAGTGGATTCTCAAAGTGAATCTTCACTATTCCTTTTCTACCCTCACAGCACTTCTCGCAGTCAACTACCTCGACAGGTTCCTCTTCACCTTCAGATTCCAGAACGACAAACCATGGCTCACGCAACTCGTTGCAGTCGCGTGTCTCTCTCTTGCAGCCAAAGTTGAAGAGACCCATGTGCCCCTTTTCGTGGACCTCCAAGTGGGGGGCAGTAAACACCTGTTCGAAGCGAAAACGGTCAAGAGAATGGAAATCTTGGTCCTTTCCACGCTTGGATGGAAGATGAACCCAGTAACACCTCTCTCGTTTCTCGATTACATCACCAGAAAACTTGGCTTAAAGGGTCATCTGGGCTTGGAGTTTCTCAGAAGGTGTGAGACCGTTCTTCTCTCTGTTTTTACAGACTCAAGATTCATGAGTTATCTTCCTTCTGTGCTGGCAACGGCTACGATGATGCGCGTGGTGAGTGTTGTGGAGCCTGGTCTGGGTGAGGAATACAAAGATCAGGTCTTGGGTATTCTCGGAATCGACAAGGAAAAGGTGAAAGAATGCTACAGGGTGATAATGGAGGTGGTGACAGGGAAGAACGAAGAAGGTAAACGAGGGAATTTGAAGAAACGGAAGTTTGAGTGCATTCAGTGTAGCCGAAACGACGTGATGGAAGGGTCGTTTAGCTGTGATAGTTCGTGTGATTCATTGAAGAAAAGCAGGAGCCAAGATCAGCTTCTATTGAAGCATTCAAACTCAGATTTTCTCACCATTCCTCGCTAG 1041 0.4707 MSHHYPKLLLDTLHCLEDHIHWEEEKQREEDDDYISTTPEPNLSDVVLFEQDLFWDTNELSSLLAKENLNNPSISLLNNPSLASSRGEAVEWILKVNLHYSFSTLTALLAVNYLDRFLFTFRFQNDKPWLTQLVAVACLSLAAKVEETHVPLFVDLQVGGSKHLFEAKTVKRMEILVLSTLGWKMNPVTPLSFLDYITRKLGLKGHLGLEFLRRCETVLLSVFTDSRFMSYLPSVLATATMMRVVSVVEPGLGEEYKDQVLGILGIDKEKVKECYRVIMEVVTGKNEEGKRGNLKKRKFECIQCSRNDVMEGSFSCDSSCDSLKKSRSQDQLLLKHSNSDFLTIPR* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00311 346 SUPERFAMILY Cyclin-like 189 285 IPR036915 -
Phac1g00311 346 Gene3D - 61 276 - -
Phac1g00311 346 Pfam Cyclin, C-terminal domain 188 289 IPR004367 -
Phac1g00311 346 CDD CYCLIN_AtCycD-like_rpt2 188 278 - -
Phac1g00311 346 PANTHER CYCLINS 73 285 IPR039361 -
Phac1g00311 346 SMART cyclin_7 91 179 IPR013763 -
Phac1g00311 346 SMART cyclin_7 192 280 IPR013763 -
Phac1g00311 346 ProSitePatterns Cyclins signature. 86 117 IPR006671 -
Phac1g00311 346 SUPERFAMILY Cyclin-like 55 186 IPR036915 -
Phac1g00311 346 FunFam D6-type cyclin 71 186 - -
Phac1g00311 346 CDD CYCLIN_AtCycD-like_rpt1 86 183 - -
Phac1g00311 346 Gene3D - 73 186 - -
Phac1g00311 346 Pfam Cyclin, N-terminal domain 77 186 IPR006671 -
Phac1g00311 346 SMART Cyclin_C_2 188 308 IPR004367 -
Phac1g00311 346 FunFam CYCLIN D32 187 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00311 Phac-Chr1 1964997 1967065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00311 8 281 Core Cell Cycle Gene Families AT4G34160 50.000 1.33e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00311 K14505 - gmx:100804102 473.011