Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00304 ATGGCAACAGCCTCAGAGAATAACACCAACGCCACGCGCCCCCAACGCGAGGCCAAGAAGAGAGCCGCAGCTGCGATATGCCAACTGCACGGGAATGCCAAGAAGAAGCGCGTCGTTTTGGGAGACCTAACCAATGTCACTCACGCCGCTGCCGCAGTTGCCGTTTCAGATATTCAAAAACGGAAAAAAATCAAACTCCAGAAACCGGTGGTGACGGTTGCAACGCCGGAGAATGTCGAGAGAAGCGACCCGCAACTGTGTGGGCCTTATGTTTCTGACATATACGAGTACCTTTGCGGAATGGAGGTTCTTCCTAGTAAGAGACCGTTACCTGATTATATCCAGAAAGTTCAGAAGGATGTGAATGCTAATATGCGCGGGGTTCTGGTGGATTGGTTGGTTGAGGTTGCGGAAGAGTATAAATTGGTGTCTGATACGTTGTATTTTTGTGTGGCGTATATAGATAGATTTTTATCGATGAATGTATTGTCCAGACAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTTATCGCTTCGAAATATGAAGAGATTAAGCCACCTGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATATATTGAAGGCTTTGAAATTTGAATTGGGTGGTCCAACAGTGAAGACATTCTTGAGGAGGTTCTGTCGAGTTGGTCAAGAGGGCATTGATGCTTCTGATCTCCAGTTTGATTTCCTTAGCTGCTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTTGTGCCATCTTTGGTGGCAGCTTCTGTTGTATTCTTAACAAGATTTATGTTAAGCACAAAGACACATCCTTGGAATTCGGCACTCCATCAACTCACTAGATATAAACCTGCCGACTTCAAGGAATGTGTTCTAAACATACATGATTTATACCTCAGTAGGAAGGGGCCTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGGTAATGTTTAACACTATTTTCCCTGCCATTTATTTAAGATGTAATATTTTCTTGGTAACTATTTTTTAA 1080 0.4324 MATASENNTNATRPQREAKKRAAAAICQLHGNAKKKRVVLGDLTNVTHAAAAVAVSDIQKRKKIKLQKPVVTVATPENVERSDPQLCGPYVSDIYEYLCGMEVLPSKRPLPDYIQKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFCVAYIDRFLSMNVLSRQRLQLLGVAAMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADILKALKFELGGPTVKTFLRRFCRVGQEGIDASDLQFDFLSCYLAELSLLDYNCVKFVPSLVAASVVFLTRFMLSTKTHPWNSALHQLTRYKPADFKECVLNIHDLYLSRKGPSLQAVREKYKQHKVMFNTIFPAIYLRCNIFLVTIF* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00304 359 PANTHER CYCLINS 56 335 IPR039361 -
Phac1g00304 359 FunFam Mitotic cyclin 6 109 209 - -
Phac1g00304 359 Gene3D - 93 338 - -
Phac1g00304 359 PIRSF Cyclin_A_B_D_E 1 347 IPR046965 GO:0016538|GO:0044772
Phac1g00304 359 SUPERFAMILY Cyclin-like 224 340 IPR036915 -
Phac1g00304 359 SMART Cyclin_C_2 224 346 IPR004367 -
Phac1g00304 359 Pfam Cyclin, N-terminal domain 93 221 IPR006671 -
Phac1g00304 359 SUPERFAMILY Cyclin-like 82 221 IPR036915 -
Phac1g00304 359 FunFam Cyclin A1 211 342 - -
Phac1g00304 359 CDD CYCLIN_AtCycA_like_rpt1 83 220 - -
Phac1g00304 359 SMART cyclin_7 131 215 IPR013763 -
Phac1g00304 359 SMART cyclin_7 228 316 IPR013763 -
Phac1g00304 359 CDD CYCLIN_AtCycA-like_rpt2 224 337 - -
Phac1g00304 359 Pfam Cyclin, C-terminal domain 224 340 IPR004367 -
Phac1g00304 359 ProSitePatterns Cyclins signature. 126 157 IPR006671 -
Phac1g00304 359 Gene3D - 109 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00304 Phac-Chr1 1878604 1882480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00304 1 337 Core Cell Cycle Gene Families AT5G43080 58.876 1.67e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00304 K06627 - gmx:100801988 557.37