Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00303 ATGGCAACAGCCTCAGAGAATAACACCAACGCCACGCGCCCCCAACGCGAGGCCAAGAAGAGAGCCGCAGCTGCGATATGCCAACTGCACGGGAATGCCAAGAAGAAGCGCGTCGTTTTGGGAGACCTAACCAATGTCACTCACGCCGCTGCCGCAGTTGCCGTTTCAGATATTCAAAAACGGAAAAAAATCAAACTCCAGAAACCGGTGGTGACGGTTGCAACGCCGGAGAATGTCGAGAGAAGCGACCCGCAACTGTGTGGGCCTTATGTTTCTGACATATACGAGTACCTTTGCGGAATGGAGAAAGTTCAGAAGGATGTGAATGCTAATATGCGCGGGGTTCTGGTGGATTGGTTGGTTGAGGTTGCGGAAGAGTATAAATTGGTGTCTGATACGTTGTATTTTTGTGTGGCGTATATAGATAGATTTTTATCGATGAATGTATTGTCCAGACAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTTATCGCTTCGAAATATGAAGAGATTAAGCCACCTGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATATATTGAAGGCTTTGAAATTTGAATTGGGTGGTCCAACAGTGAAGACATTCTTGAGGAGGTTCTGTCGAGTTGGTCAAGAGGGCATTGATGCTTCTGATCTCCAGTTTGATTTCCTTAGCTGCTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTTGTGCCATCTTTGGTGGCAGCTTCTGTTGTATTCTTAACAAGATTTATGTTAAGCACAAAGACACATCCTTGGAATTCGGCACTCCATCAACTCACTAGATATAAACCTGCCGACTTCAAGGAATGTGTTCTAAACATACATGATTTATACCTCAGTAGGAAGGGGCCTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCCGAGATACCCCTTTCTTTTTTTGAATTTTCAGGGTCAGATTCTTAG 1050 0.4448 MATASENNTNATRPQREAKKRAAAAICQLHGNAKKKRVVLGDLTNVTHAAAAVAVSDIQKRKKIKLQKPVVTVATPENVERSDPQLCGPYVSDIYEYLCGMEKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFCVAYIDRFLSMNVLSRQRLQLLGVAAMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADILKALKFELGGPTVKTFLRRFCRVGQEGIDASDLQFDFLSCYLAELSLLDYNCVKFVPSLVAASVVFLTRFMLSTKTHPWNSALHQLTRYKPADFKECVLNIHDLYLSRKGPSLQAVREKYKQHKFKCVATTPSPPEIPLSFFEFSGSDS* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00303 349 Pfam Cyclin, C-terminal domain 211 333 IPR004367 -
Phac1g00303 349 Gene3D - 99 203 - -
Phac1g00303 349 SUPERFAMILY Cyclin-like 82 208 IPR036915 -
Phac1g00303 349 Pfam Cyclin, N-terminal domain 101 208 IPR006671 -
Phac1g00303 349 Gene3D - 204 338 - -
Phac1g00303 349 SUPERFAMILY Cyclin-like 211 336 IPR036915 -
Phac1g00303 349 PIRSF Cyclin_A_B_D_E 1 339 IPR046965 GO:0016538|GO:0044772
Phac1g00303 349 FunFam Mitotic cyclin 6 96 196 - -
Phac1g00303 349 PANTHER CYCLINS 54 328 IPR039361 -
Phac1g00303 349 SMART cyclin_7 118 202 IPR013763 -
Phac1g00303 349 SMART cyclin_7 215 303 IPR013763 -
Phac1g00303 349 SMART Cyclin_C_2 211 334 IPR004367 -
Phac1g00303 349 ProSitePatterns Cyclins signature. 113 144 IPR006671 -
Phac1g00303 349 CDD CYCLIN_AtCycA-like_rpt2 211 325 - -
Phac1g00303 349 FunFam Cyclin A1 198 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00303 Phac-Chr1 1878604 1882480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00303 1 343 Core Cell Cycle Gene Families AT5G43080 57.746 2.70e-142 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00303 K06627 - gmx:100801988 573.163