Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00302 ATGGCAACAGCCTCAGAGAATAACACCAACGCCACGCGCCCCCAACGCGAGGCCAAGAAGAGAGCCGCAGCTGCGATATGCCAACTGCACGGGAATGCCAAGAAGAAGCGCGTCGTTTTGGGAGACCTAACCAATGTCACTCACGCCGCTGCCGCAGTTGCCGTTTCAGATATTCAAAAACGGAAAAAAATCAAACTCCAGAAACCGGTGGTGACGGTTGCAACGCCGGAGAATGTCGAGAGAAGCGACCCGCAACTGTGTGGGCCTTATGTTTCTGACATATACGAGTACCTTTGCGGAATGGAGGTTCTTCCTAGTAAGAGACCGTTACCTGATTATATCCAGAAAGTTCAGAAGGATGTGAATGCTAATATGCGCGGGGTTCTGGTGGATTGGTTGGTTGAGGTTGCGGAAGAGTATAAATTGGTGTCTGATACGTTGTATTTTTGTGTGGCGTATATAGATAGATTTTTATCGATGAATGTATTGTCCAGACAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTTATCGCTTCGAAATATGAAGAGATTAAGCCACCTGAGGTGGAGGACTTTTGTTACATTACGGATAATACATACTCTAAGGAAGAGGTTGTGAATATGGAAGCCGATATATTGAAGGCTTTGAAATTTGAATTGGGTGGTCCAACAGTGAAGACATTCTTGAGGAGGTTCTGTCGAGTTGGTCAAGAGGGCATTGATGCTTCTGATCTCCAGTTTGATTTCCTTAGCTGCTACCTTGCTGAGCTCAGTTTGTTGGATTATAATTGTGTAAAGTTTGTGCCATCTTTGGTGGCAGCTTCTGTTGTATTCTTAACAAGATTTATGTTAAGCACAAAGACACATCCTTGGAATTCGGCACTCCATCAACTCACTAGATATAAACCTGCCGACTTCAAGGAATGTGTTCTAAACATACATGATTTATACCTCAGTAGGAAGGGGCCTTCTTTGCAAGCTGTGAGAGAGAAATACAAACAGCATAAGTTCAAATGTGTGGCAACAACACCATCTCCTCCCGAGATACCCCTTTCTTTTTTTGAATTTTCAGGGTCAGATTCTTAG 1089 0.4435 MATASENNTNATRPQREAKKRAAAAICQLHGNAKKKRVVLGDLTNVTHAAAAVAVSDIQKRKKIKLQKPVVTVATPENVERSDPQLCGPYVSDIYEYLCGMEVLPSKRPLPDYIQKVQKDVNANMRGVLVDWLVEVAEEYKLVSDTLYFCVAYIDRFLSMNVLSRQRLQLLGVAAMLIASKYEEIKPPEVEDFCYITDNTYSKEEVVNMEADILKALKFELGGPTVKTFLRRFCRVGQEGIDASDLQFDFLSCYLAELSLLDYNCVKFVPSLVAASVVFLTRFMLSTKTHPWNSALHQLTRYKPADFKECVLNIHDLYLSRKGPSLQAVREKYKQHKFKCVATTPSPPEIPLSFFEFSGSDS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00302 362 Gene3D - 109 222 - -
Phac1g00302 362 FunFam Mitotic cyclin 6 109 209 - -
Phac1g00302 362 Pfam Cyclin, N-terminal domain 93 221 IPR006671 -
Phac1g00302 362 PANTHER CYCLINS 56 341 IPR039361 -
Phac1g00302 362 Pfam Cyclin, C-terminal domain 224 346 IPR004367 -
Phac1g00302 362 SUPERFAMILY Cyclin-like 82 221 IPR036915 -
Phac1g00302 362 CDD CYCLIN_AtCycA-like_rpt2 224 338 - -
Phac1g00302 362 PIRSF Cyclin_A_B_D_E 1 352 IPR046965 GO:0016538|GO:0044772
Phac1g00302 362 Gene3D - 93 343 - -
Phac1g00302 362 SMART Cyclin_C_2 224 347 IPR004367 -
Phac1g00302 362 CDD CYCLIN_AtCycA_like_rpt1 83 220 - -
Phac1g00302 362 SMART cyclin_7 131 215 IPR013763 -
Phac1g00302 362 SMART cyclin_7 228 316 IPR013763 -
Phac1g00302 362 FunFam Cyclin A1 211 343 - -
Phac1g00302 362 ProSitePatterns Cyclins signature. 126 157 IPR006671 -
Phac1g00302 362 SUPERFAMILY Cyclin-like 224 349 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00302 Phac-Chr1 1878604 1883147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00302 1 356 Core Cell Cycle Gene Families AT5G43080 59.384 3.90e-149 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00302 K06627 - gmx:100801988 602.053