Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac1g00155 | ATGGGTTGGCTTAGCAGAATTTTTAAAGGGTCTGAGCAGAAGATTTCGGAGGGGCATTATAGTAAAGAGGATGCTGGTTATTATCTGCCATCGACTTCTGGGGATGTTTGGAACCAGAACGAGAATGAGGATATAGATCGTGCTATTGCACTGTCTCTGGCCGAAGAGAGCGAGAAAACAAACATTGTAAATGACAACAGATCACAGTTAGAAGAAGATGAACAACTTGCCAGAGCTTTAGAGGAAAGTCTAAACGTGGAGTCTCCTCCCAGATATGGAAATGAAAATGCGTATCAACCAATTCAGTATTTCCCCATGGGGTCCAGGATTTGTGCTGGCTGCTATATTGAGATTGGTTACGGGCGATATCTTAATTGCTTGAACGCATTCTGGCATCCTGAATGCTTCCGCTGCCGAGCTTGCAACCTACCAATCTCTGATTATGAGTTCTCCACATCTGGGAATTACCCTTACCATAAATCATGTTATAAGGAAAGCTACCACCCGAAATGTGATGTCTGCAAGCACTTTATTCCAACAAATCCTGCTGGTCTTATTGAATATAGGGCACATCCATTCTGGGTTCAGAAATATTGCCCTTCTCATGAACATGACTGTACTCCACGATGTTGCAGTTGTGAGCGAATGGAGTCGCAAGAGGCAGGATATATTGCTCATAAGGATGGCCGGAAGCTCTGCTTAGAGTGTCTGGATTCTGCTATCATGGATACAAATGAATGCCAACCCCTTCATGCTGATATACAAAGATTTTATGAAAGCCTAAATATGAAACTGGACCAGCAAATTCCACTATTATTGGTTGAAAGACAAGCACTGAATGAAGCAAGAGAGGGAGATAAGAATGGACACTATCACATGCCGGAAACCAGAGGGCTCTGCCTCTCCGAGGAGCTCAGCACTTTCTCGAGAAGACCAAGATTTGGGTCAGGAAATGGAGCAATGGACATGAGAGCACAGCCATACAGGATGACTCCACATTGTGATGTGACAGCTATTCTCATTTTATATGGCCTTCCAAGGTAA | 1044 | 0.4377 | MGWLSRIFKGSEQKISEGHYSKEDAGYYLPSTSGDVWNQNENEDIDRAIALSLAEESEKTNIVNDNRSQLEEDEQLARALEESLNVESPPRYGNENAYQPIQYFPMGSRICAGCYIEIGYGRYLNCLNAFWHPECFRCRACNLPISDYEFSTSGNYPYHKSCYKESYHPKCDVCKHFIPTNPAGLIEYRAHPFWVQKYCPSHEHDCTPRCCSCERMESQEAGYIAHKDGRKLCLECLDSAIMDTNECQPLHADIQRFYESLNMKLDQQIPLLLVERQALNEAREGDKNGHYHMPETRGLCLSEELSTFSRRPRFGSGNGAMDMRAQPYRMTPHCDVTAILILYGLPR* | 348 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac1g00155 | 347 | FunFam | Protein DA1-related 1 | 105 | 164 | - | - | |
| Phac1g00155 | 347 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 104 | 136 | - | - | |
| Phac1g00155 | 347 | PANTHER | PROTEIN DA1-RELATED 2 | 3 | 347 | IPR045218 | - | |
| Phac1g00155 | 347 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 71 | 90 | IPR003903 | - | |
| Phac1g00155 | 347 | SMART | lim_4 | 110 | 162 | IPR001781 | - | |
| Phac1g00155 | 347 | ProSitePatterns | LIM zinc-binding domain signature. | 111 | 145 | IPR001781 | - | |
| Phac1g00155 | 347 | Gene3D | Cysteine Rich Protein | 103 | 169 | - | - | |
| Phac1g00155 | 347 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 137 | 192 | - | - | |
| Phac1g00155 | 347 | CDD | LIM_DA1 | 111 | 163 | - | - | |
| Phac1g00155 | 347 | Pfam | Ubiquitin interaction motif | 41 | 55 | IPR003903 | - | |
| Phac1g00155 | 347 | Pfam | Ubiquitin interaction motif | 71 | 84 | IPR003903 | - | |
| Phac1g00155 | 347 | Coils | Coil | 63 | 83 | - | - | |
| Phac1g00155 | 347 | SMART | uim | 71 | 90 | IPR003903 | - | |
| Phac1g00155 | 347 | SMART | uim | 40 | 59 | IPR003903 | - | |
| Phac1g00155 | 347 | Pfam | Protein DA1 | 261 | 347 | IPR022087 | - | |
| Phac1g00155 | 347 | ProSiteProfiles | LIM domain profile. | 109 | 169 | IPR001781 | - | |
| Phac1g00155 | 347 | ProSiteProfiles | Ubiquitin-interacting motif (UIM) domain profile. | 40 | 59 | IPR003903 | - | |
| Phac1g00155 | 347 | Pfam | LIM domain | 111 | 165 | IPR001781 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac1g00155 | Phac-Chr1 | 1117463 | 1122853 | Tandem |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | Others | Phac1g00155 | DA1-like | 1.3e-32 | CL0126 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac1g00155 | - | - | gmx:100809736 | 653.669 |