Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00141 ATGTTCACCAATTCTCACACGGTAATGCAAACTTTGTTGTCACCTTTGCCGGAGCCAGACCTCTCCTTGAACATAAGTCCTCCCTCCGTTTCAGATATTTCTGAGGTGAAGGAAGTGGGGGGCTTCAGCAAAGCGATTCACAACGACATGTGCTCAACTTCTGATTCCGGGAGCAGTGGAGGAAGTGATTTGAGCCATGAGTTCCACAACCTTGGTCACCACCGTGAGCCGTCGTTGAAGTTAGGCTTTGGAACCGCGGATTTGAATCCTCGCCGTCAGGTTCAAGGTGACACGAGAAGCTTCAACCACCACCACCACCACCTTCAACCTCACATCTATGGCCGCGATTTCAAACGAACTGCAAGAGTCGTCAATGGCGTCAAGAGAAGCGTCAGGGCTCCCAGGATGAGATGGACCACCACCCTCCATGCCCATTTTGTTCACGCGGTTCAGCTTCTTGGCGGCCATGAAAGAGCAACTCCGAAGTCTGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCAGCACAGGTCATGATATTGGAGTATTGAATCCAAGGCCAGGGATTAACATACTTCATCTGCATGCACCCTCACCCAATCTACCACACCCCATTCAAACTTCCCACAGGACACAGATAGAGACAAAAACAAACAATAGTAGACAAGATGCAGAGATGGGTTTGACGTGTTCTGACCTCAAGGGAAGTGAAAGCATGGTGAATAATGCTCACAGTTATGGTGTTGGAGGCTTGGATTCCACCACTTTGTCACGTTCCGAGGGAATGCTTGACCTTGAATTCAGCCTTGGAAGACCCATTTGGCAAAAAGACCACGCAGAATCATCCAGAGAGATAACTCTTTTAAAGTGTTGA 933 0.4812 MFTNSHTVMQTLLSPLPEPDLSLNISPPSVSDISEVKEVGGFSKAIHNDMCSTSDSGSSGGSDLSHEFHNLGHHREPSLKLGFGTADLNPRRQVQGDTRSFNHHHHHLQPHIYGRDFKRTARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGSTGHDIGVLNPRPGINILHLHAPSPNLPHPIQTSHRTQIETKTNNSRQDAEMGLTCSDLKGSESMVNNAHSYGVGGLDSTTLSRSEGMLDLEFSLGRPIWQKDHAESSREITLLKC* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00141 310 Pfam Myb-like DNA-binding domain 135 186 IPR001005 -
Phac1g00141 310 NCBIfam myb-like DNA-binding domain, SHAQKYF class 134 187 IPR006447 GO:0003677
Phac1g00141 310 FunFam Myb family transcription factor 132 190 - -
Phac1g00141 310 Gene3D - 133 190 - -
Phac1g00141 310 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 19 298 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phac1g00141 310 SUPERFAMILY Homeodomain-like 131 188 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00141 Phac-Chr1 999322 1004844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00141 101 197 G2-like Transcription Factor Family AT5G42630 80.198 1.73e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac1g00141 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00141 - - vra:106764099 513.072