Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00127 ATGAGAGTAACCAAACAATGCTCTTCTTCATCCTCTTCTCATTCTTCTACTAGTAATAATGATCATAATAACAATACTTGTGTCAGAATAAAAGGGGCATGGAGTGTGGAAGAAGATAGGGTTCTCACTGGGCTTGTGGAGGCCCATGGGCCGAGAAACTGGGCCTTGATAAGCCGACACGTAAAGGGCCGGTCTGGGAAGTCGTGCAGGCTTCGGTGGTGCAACAAACTGAGTCCCGCTGTGGAGCACCGACCCTTCACCACGCGCGAGAACGCGGTTATCTTGCACGCGCAGGATCGGTTAGGGAACAAGTGGGCCACCATTGCGAGAATGCTTCCGGGCCGGACCGATAACGCCGTTAAGAATCACTGGAACGCCACGCTCAAGCGCATGCCCCCCCAACGATGTCGTTTTGGAGATTAA 423 0.5248 MRVTKQCSSSSSSHSSTSNNDHNNNTCVRIKGAWSVEEDRVLTGLVEAHGPRNWALISRHVKGRSGKSCRLRWCNKLSPAVEHRPFTTRENAVILHAQDRLGNKWATIARMLPGRTDNAVKNHWNATLKRMPPQRCRFGD* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00127 140 PANTHER MYB PROTEIN-RELATED 31 130 - -
Phac1g00127 140 Gene3D - 84 137 - -
Phac1g00127 140 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 132 IPR017930 -
Phac1g00127 140 Pfam Myb-like DNA-binding domain 85 125 IPR001005 -
Phac1g00127 140 Pfam Myb-like DNA-binding domain 31 75 IPR001005 -
Phac1g00127 140 CDD SANT 33 77 IPR001005 -
Phac1g00127 140 SMART sant 82 130 IPR001005 -
Phac1g00127 140 SMART sant 30 79 IPR001005 -
Phac1g00127 140 FunFam MYB transcription factor 31 82 - -
Phac1g00127 140 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 81 IPR017930 -
Phac1g00127 140 Gene3D - 30 82 - -
Phac1g00127 140 ProSiteProfiles Myb-like domain profile. 31 77 IPR001005 -
Phac1g00127 140 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Phac1g00127 140 SUPERFAMILY Homeodomain-like 30 124 IPR009057 -
Phac1g00127 140 MobiDBLite consensus disorder prediction 1 25 - -
Phac1g00127 140 CDD SANT 85 128 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00127 Phac-Chr1 923841 924388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00127 29 139 MYB Transcription Factor Family AT4G37260 64.912 6.10e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac1g00127 Myb_DNA-binding 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00127 - - vun:114195298 236.884