Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00122 ATGAGTCCAATGTTGTCGATGAAAGTTCTTGTGTGGTTCATGTTTTTGTCTTGGAGCCACTTTGCCATGCCATGTGAGGCCAACCAACAAGGGGAATATCTGTACAAGTTAATTCGATCAAAGAGGGGTGAGAAAGTGAGGTCAGAAGAAGCTTCAATGGCGACAAAAATTGGTGATGGAGAATTTTGGAAGGTTGAGGAAGAAAGGGTGTTGATGGAAGATGACAAGGTGAAGGGTTTGCCGGGAGAACCAGAAGGGGTGGATTTTGATCAGTATGGTGGCTATGTAACTGTGGATGCCAAAGCTGGAAGAAGATTGTTCTACTACTTTGTGGAGTCACCTCACAATGCTTCCAACAAGCCCCTTGTTCTATGGCTCAATGGAGGACCTGGATGCTCTTCCCTTGGATATGGAGCCATGCAAGAATTAGGACCTTTTAGAGTGAACAGTGATGGAAGAACACTTCGCAAAAATGAATATGCATGGAACAATGTGGCAAATGTTATTTTCCTAGAGTCTCCAGCAGGAGTTGGATTTTCATATTCAAACACTTCTTCTGACTACTCTAACAGTGGAGACAAGAGAACAGCCATGGACTCTTACACTTTTCTCATAAACTGGCTCAACAGATTTCCACACTACAAATCAAGAGACTTGTTCATCACTGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTTGCTCACACTATTCTCACTAATAATAACCTCACAAATCACACACTTCTTAACCTCAAAGGGGTTGCGATTGGGAATGGTTGGATAGATGATAATATGTGTGAAAAAGGAATGTATGAGTATTTCTGGACACATGCTATGAACTCTGATGAAACCCATGAAGGAATTGAAAGGCATTGTGACTATGAGAGTGGGAACTTAACAAGTGATCAATGCAACAAATATCAAAGAAGAGGGGATGATGAGATTGGAGACAGCAATTTCGACCCTTGTTCTGACGAATATACCAAATCCTACTTAAATCTGGCCCAAGTACAAGAGGCTCTTCATGCTAAAGTCTCAGAATGGTCTCCATGCAGTCCCGTGGGATGGACAGATAGCCCAGCAACAATTCTACCCACTATAAGTGGGATAATATCAAGTGGCATAAGAACATGGATATATAGTGGTGATACAGATGGGCGTGTTCCCATAACATCATCTAGGTATTCAGTAAATGCCTTGAAACTTCCAGTGGAGACAACATGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATACTTGATTGGGTACAAAGGGCTCACCCTCATCACTGTAAGAGGAGCTGGCCACATGGTTCCAAGTTACCAACCAAAGCGAGCGTTAACCATGATCTCATTTTTTCTTCAGGGAGAACTTCCTCCCGAATCAAACTCTTAG 1401 0.4283 MSPMLSMKVLVWFMFLSWSHFAMPCEANQQGEYLYKLIRSKRGEKVRSEEASMATKIGDGEFWKVEEERVLMEDDKVKGLPGEPEGVDFDQYGGYVTVDAKAGRRLFYYFVESPHNASNKPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGRTLRKNEYAWNNVANVIFLESPAGVGFSYSNTSSDYSNSGDKRTAMDSYTFLINWLNRFPHYKSRDLFITGESYAGHYVPQLAHTILTNNNLTNHTLLNLKGVAIGNGWIDDNMCEKGMYEYFWTHAMNSDETHEGIERHCDYESGNLTSDQCNKYQRRGDDEIGDSNFDPCSDEYTKSYLNLAQVQEALHAKVSEWSPCSPVGWTDSPATILPTISGIISSGIRTWIYSGDTDGRVPITSSRYSVNALKLPVETTWRPWYSGNEVGGYLIGYKGLTLITVRGAGHMVPSYQPKRALTMISFFLQGELPPESNS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00122 466 SUPERFAMILY alpha/beta-Hydrolases 74 459 IPR029058 -
Phac1g00122 466 Gene3D - 327 355 - -
Phac1g00122 466 Pfam Serine carboxypeptidase 81 307 IPR001563 GO:0004185|GO:0006508
Phac1g00122 466 Pfam Serine carboxypeptidase 319 457 IPR001563 GO:0004185|GO:0006508
Phac1g00122 466 ProSitePatterns Serine carboxypeptidases, serine active site. 221 228 IPR018202 GO:0004185
Phac1g00122 466 FunFam Carboxypeptidase 71 325 - -
Phac1g00122 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Phac1g00122 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Phac1g00122 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Phac1g00122 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 232 IPR001563 GO:0004185|GO:0006508
Phac1g00122 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Phac1g00122 466 Gene3D alpha/beta hydrolase 71 326 IPR029058 -
Phac1g00122 466 Gene3D - 364 458 - -
Phac1g00122 466 FunFam Carboxypeptidase 364 458 - -
Phac1g00122 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 76 445 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00122 Phac-Chr1 883220 889179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00122 329 459 Calmodulin-binding Proteins AT2G22960 29.412 4.98e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00122 K16297 - gmx:100818983 766.148