Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00100 ATGGCTGGGTTCTTCTCTCTAGGAGGAAGGCATAACAAAGCAGAACAAGAGGAGGATCAGAGAGAGGACAACAACACCAACAACAACCACAACAGTCAATTTTTGTTCAGAAACGTTAACGAGGAGATCTACAACACCAACAAGGGCTTCGAGATATGGCCGCAATCCTCGTACCACCACAACTTCACCAACTACTACTCCTTCGGAGTGGGCCCTAGTCGCAGGAACAACGCCAACACCAACAACAGCTCCTCCAACAACGTAAACGACGACGTCTCTGTCTCTTTCTCGGATGACTCCAACCGCTTCGGGTTCACGGTCATGAGGTCCGCTGGCGGCGTGGGTGGCGGCGGAGGCGGCGGCATGAACTGTCAGGACTGCGGGAACCAAGCTAAGAAAGACTGCTCGCACCTCAGATGCAGAACCTGCTGCAAGAGTCGAGGGTTTCAGTGCCAAACTCACGTTAAGAGCACTTGGGTTCCCGCCGCCAAGCGCCGTGAACGACAGCAGCAACTAGCTACGTTGCAGCAACAAAATCAACCACCGCAGTTTCGCGGAGATCACTCGAAAAGACACAGAGAAAGTATCGAAGGTGCTGCAGCTGGTGGTTCTCTCGCTTGCGCTCCACTTCCTATCACCACCACAGGGTTGGAGGTGGGTCAATTTCCACCGGAGCTAAACTCTCCGGCGGTGTTCCGGTGTGTGAAAGTGAGTGCAATGGATGCACCGGACGAGCGTTACGCGTACCAAACAGCAGTGAACATAGGAGGGCACGTGTTCAAGGGAATTCTCTACGATCAAGGAGTGGACGGTCCTTACGCCAGTGCAGGTTGCGAGGGTTCCTCCGGTGGCGGCGGTGAAGCTCGGGCACTCACTCTAATGGCCGCCACAACCACCGCCACAACAGCTGGAAACCCTTTTGACGCTTCACTCTACACTGCTCCGATGAATGCTTTCATGGCTGGTACGCAATTCTTCCCACCCCCAAGATCCTAA 996 0.5442 MAGFFSLGGRHNKAEQEEDQREDNNTNNNHNSQFLFRNVNEEIYNTNKGFEIWPQSSYHHNFTNYYSFGVGPSRRNNANTNNSSSNNVNDDVSVSFSDDSNRFGFTVMRSAGGVGGGGGGGMNCQDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLATLQQQNQPPQFRGDHSKRHRESIEGAAAGGSLACAPLPITTTGLEVGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGVDGPYASAGCEGSSGGGGEARALTLMAATTTATTAGNPFDASLYTAPMNAFMAGTQFFPPPRS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00100 331 MobiDBLite consensus disorder prediction 165 193 - -
Phac1g00100 331 MobiDBLite consensus disorder prediction 11 25 - -
Phac1g00100 331 MobiDBLite consensus disorder prediction 1 33 - -
Phac1g00100 331 NCBIfam LRP1 C-terminal domain 221 269 IPR006511 -
Phac1g00100 331 Pfam Domain of unknown function (DUF702) 121 270 - -
Phac1g00100 331 NCBIfam putative zinc finger domain, LRP1 type 123 165 IPR006510 -
Phac1g00100 331 MobiDBLite consensus disorder prediction 169 184 - -
Phac1g00100 331 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 303 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00100 Phac-Chr1 772109 774686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00100 1 330 C2H2 Transcription Factor Family AT1G19790 47.790 2.03e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Phac1g00100 DUF702 6.5e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00100 - - gmx:100794846 471.855