Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00099 ATGCATCTCAATCACTTGCCACTTTTCATAACCATTACAGAACTAAACCCCACGCTTCCTTTATTCTCCTTCTTCTCAAAACTTCACTTCCTTCTCACACAAAACCTTCTTCAACTTCAAACCATGAAGATCCAATGCGACGTCTGTAACAAACACGATGCATCGGTCTTTTGCACCGCCGATGAAGCCGCCCTCTGCGACGGCTGCGACCACCGCATCCACCACGCCAACAAACTAGCCTCCAAACACCAGCGTTTCTCTCTTCTTCGGCCTAAACAACACCCTCTCTGCGATATTTGTCAGGAGAGAAGAGCCTTCACGTTCTGTCAGCAAGACAGGGCGATTCTGTGCAGGGAGTGTGACGTGTCGATTCACTCTGCCAACGAACACACCCTTAAGCATGATAGGTTCCTTCTCACTGGTCTTAAACTTTCTGCTTCTTCTTCATCACAAGAAACTACCTCCACTTCAAACTCAGCCCCTGATTCTCTTCTTCAAGTTTCGCATCAAAAAACAACACCTTTATCTTCCACCCTGAGTAAGATTGGTGTTGAAGCAGCGCCTTCCACAAGTGCTAGCAGCATATCAGAGTATTTGATAGAGACTCTTCCCGGGTGGCAGGTTGAAGACTTTCTCGATTCATATTCTGTTCCCTTTGGTTTCTCCAAGAGTGATGAAGTGTTGCCACGGTTTGATGGTGAGACGGAGGCTCATCTGGGGTCCTTCTCAACAGAGAACATGGGGATATGGGTTCCTCAAGCGCCACCACCTCTTGTGAGTTATTCCCAGATGGATAAAGTGATTGGTCAAAGCGAGAGCAACATGAAAGGTAGCAGATCGAGGTTGAAGGATGATAATTTCACTGTGCCACAGATTAGTCCTCAGTCCAATCCCAAGAGAGGAAGGTTTCTATGGTAG 918 0.4706 MHLNHLPLFITITELNPTLPLFSFFSKLHFLLTQNLLQLQTMKIQCDVCNKHDASVFCTADEAALCDGCDHRIHHANKLASKHQRFSLLRPKQHPLCDICQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGLKLSASSSSQETTSTSNSAPDSLLQVSHQKTTPLSSTLSKIGVEAAPSTSASSISEYLIETLPGWQVEDFLDSYSVPFGFSKSDEVLPRFDGETEAHLGSFSTENMGIWVPQAPPPLVSYSQMDKVIGQSESNMKGSRSRLKDDNFTVPQISPQSNPKRGRFLW* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00099 305 ProSiteProfiles Zinc finger B-box type profile. 41 88 IPR000315 GO:0008270
Phac1g00099 305 ProSiteProfiles Zinc finger B-box type profile. 92 139 IPR000315 GO:0008270
Phac1g00099 305 FunFam B-box zinc finger protein 21 42 137 - -
Phac1g00099 305 MobiDBLite consensus disorder prediction 284 298 - -
Phac1g00099 305 CDD Bbox1_BBX-like 96 139 - -
Phac1g00099 305 CDD Bbox1_BBX-like 46 88 - -
Phac1g00099 305 Gene3D Classic Zinc Finger 41 134 - -
Phac1g00099 305 PANTHER B-BOX ZINC FINGER PROTEIN 22 42 297 - -
Phac1g00099 305 MobiDBLite consensus disorder prediction 273 305 - -
Phac1g00099 305 MobiDBLite consensus disorder prediction 149 168 - -
Phac1g00099 305 SMART bboxneu5 41 88 IPR000315 GO:0008270
Phac1g00099 305 SMART bboxneu5 92 139 IPR000315 GO:0008270
Phac1g00099 305 Pfam B-box zinc finger 93 132 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00099 Phac-Chr1 748880 750701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00099 42 305 C2C2-CO-like Transcription Factor Family AT1G75540 45.373 2.38e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac1g00099 zf-B_box 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00099 - - gmx:100807827 416.001