Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00098 ATGCATCTCAATCACTTGCCACTTTTCATAACCATTACAGAACTAAACCCCACGCTTCCTTTATTCTCCTTCTTCTCAAAACTTCACTTCCTTCTCACACAAAACCTTCTTCAACTTCAAACCATGAAGATCCAATGCGACGTCTGTAACAAACACGATGCATCGGTCTTTTGCACCGCCGATGAAGCCGCCCTCTGCGACGGCTGCGACCACCGCATCCACCACGCCAACAAACTAGCCTCCAAACACCAGCGTTTCTCTCTTCTTCGGCCTAAACAACACCCTCTCTGCGATATTTGTCAGGAGAGAAGAGCCTTCACGTTCTGTCAGCAAGACAGGGCGATTCTGTGCAGGGAGTGTGACGTGTCGATTCACTCTGCCAACGAACACACCCTTAAGCATGATAGGTTCCTTCTCACTGGTCTTAAACTTTCTGCTTCTTCTTCATCACAAGAAACTACCTCCACTTCAAACTCAGCCCCTGATTCTCTTCTTCAAGTTTCGCATCAAAAAACAACACCTTTATCTTCCACCCTGAGTAAGATTGGTGTTGAAGCAGCGCCTTCCACAAGTGCTAGCAGCATATCAGAGTATTTGATAGAGACTCTTCCCGGGTGGCAGGTTGAAGACTTTCTCGATTCATATTCTGTTCCCTTTGGTTTCTCCAAGGTTTGCACTTTCTTCTTTCAATCATTGAAATCAATTGATTCTTCTATTCTTTTACACTGA 729 0.4527 MHLNHLPLFITITELNPTLPLFSFFSKLHFLLTQNLLQLQTMKIQCDVCNKHDASVFCTADEAALCDGCDHRIHHANKLASKHQRFSLLRPKQHPLCDICQERRAFTFCQQDRAILCRECDVSIHSANEHTLKHDRFLLTGLKLSASSSSQETTSTSNSAPDSLLQVSHQKTTPLSSTLSKIGVEAAPSTSASSISEYLIETLPGWQVEDFLDSYSVPFGFSKVCTFFFQSLKSIDSSILLH* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00098 242 ProSiteProfiles Zinc finger B-box type profile. 41 88 IPR000315 GO:0008270
Phac1g00098 242 ProSiteProfiles Zinc finger B-box type profile. 92 139 IPR000315 GO:0008270
Phac1g00098 242 Gene3D Classic Zinc Finger 41 134 - -
Phac1g00098 242 FunFam B-box zinc finger protein 21 42 137 - -
Phac1g00098 242 CDD Bbox1_BBX-like 96 139 - -
Phac1g00098 242 CDD Bbox1_BBX-like 46 88 - -
Phac1g00098 242 Pfam B-box zinc finger 93 132 IPR000315 GO:0008270
Phac1g00098 242 SMART bboxneu5 41 88 IPR000315 GO:0008270
Phac1g00098 242 SMART bboxneu5 92 139 IPR000315 GO:0008270
Phac1g00098 242 PANTHER B-BOX ZINC FINGER PROTEIN 22 42 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00098 Phac-Chr1 748880 750701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00098 42 223 C2C2-CO-like Transcription Factor Family AT1G75540 58.252 8.11e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phac1g00098 zf-B_box 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00098 - - gmx:100790972 288.5