Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac1g00075 ATGGCAGTCACATTCTACGACCTTAGCTCTGCCTCTGGGTTGAAGAAGCTTGACGAGTACCTTCTCCCACGCAGTTACATCACCGGGTACCAAGCTTCAAAGGATGATCTCACTGTCTATGCAGCTTTGCCAACTGCTCCATCAGCTGAGTATGTGAATGTGTCCAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATCTCTGGTGTTTCTGGTGAGGGGTCCGGTGTCACTGTTGAGGGATCTCTTGTTTCCGAGCCTGTTGCAACTCCCCCAGCTGCTGATACAAAGGCTGCTGCTGCTGTGGATGACGACGACGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAGGAAGAGAAGAAGGCAGCTGAGGAAAGGGCAGCTGCAGTGAAGGCATCTGGAAAAAAGAAAGAGTCTGGGAAATCATCTGTTCTGTTGGATGTGAAACCATGGGACGATGAAACCGACATGAAGAAGCTCGAGGAGGCAGTGAGATCTGTTAGCATGGAAGGGTTGCTTTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGCATCAAGAAACTGCAAATTATGCTTACTATCGTGGATGACCTAGTTTCTGTCGACGATCTTATTGAGGAACGTCTCACAGTTGAGCCCGTCAATGAATATGTCCAGAGTTGTGACATTGTAGCCTTCAATAAAATTTGTAAAATCTACAATCGTGGGACTTGGAGATCATGGCAACGAGATGAATTGTGA 747 0.4739 MAVTFYDLSSASGLKKLDEYLLPRSYITGYQASKDDLTVYAALPTAPSAEYVNVSRWYKHIDALLRISGVSGEGSGVTVEGSLVSEPVATPPAADTKAAAAVDDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVSMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDDLIEERLTVEPVNEYVQSCDIVAFNKICKIYNRGTWRSWQRDEL* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac1g00075 248 Gene3D - 4 78 - -
Phac1g00075 248 MobiDBLite consensus disorder prediction 116 136 - -
Phac1g00075 248 FunFam Elongation factor 1-beta 1 like 136 231 - -
Phac1g00075 248 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Phac1g00075 248 MobiDBLite consensus disorder prediction 101 115 - -
Phac1g00075 248 MobiDBLite consensus disorder prediction 87 136 - -
Phac1g00075 248 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Phac1g00075 248 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Phac1g00075 248 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Phac1g00075 248 CDD EF1B 140 231 IPR014038 GO:0003746|GO:0006414
Phac1g00075 248 SUPERFAMILY GST C-terminal domain-like 11 67 IPR036282 -
Phac1g00075 248 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Phac1g00075 248 Gene3D - 135 231 IPR014717 -
Phac1g00075 248 FunFam Elongation factor 1-delta 1 3 78 - -
Phac1g00075 248 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Phac1g00075 248 Coils Coil 114 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac1g00075 Phac-Chr1 534189 536314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac1g00075 5 231 Eukaryotic Initiation Factors Gene Family AT2G18110 79.039 1.63e-112 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac1g00075 K03232 - gmx:100777627 316.62